LOCUS AK101191 2276 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:J033030G03, full insert sequence. ACCESSION AK101191 VERSION AK101191.1 KEYWORDS CAP trapper; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 2276) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (27-AUG-2002) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..2276 /clone="J033030G03" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" CDS 77..1969 /db_xref="Osa1:LOC_Os06g44970" /db_xref="RAP-DB:Os06g0660200" /note="(RAP Annotation release2) Similar to Auxin efflux carrier protein" /note="(Rice Genome Annotation Project) auxin efflux carrier component 2, putative, expressed" /note="mapping to R06-TIGRv4S1-000915F (Chr.6: short arm=27199810, long arm=27203614, direction=forward) for TIGR Pseudomol ver4" /protein_id="BAG94949.1" /translation="MITGRDIYDVLAAIVPLYVAMFLAYGSVRWWGIFTPDQCSGINR FVAVFAVPLLSFHFISTNDPYSMNYRFLAADSLQKLVILAALAVWHNLLSRYRRNGGA AASLDWTITLFSLSTLPNTLVMGIPLLRAMYGDFSGSLMVQIVVLQSVIWYTLMLFLF EYRGAKALISEQFPPDVGASIASFRVDSDVVSLNGREALQADAEVGRDGRVHVVIRRS ASASTTGGGGGAARSGVSRAYGASNAMTPRASNLTGVEIYSLQTSREPTPRASSFNQA DFYAMFSGSKMASQMASPMAQHGGAGGRAQGLDEQVTNKFASGKAADPPSYPAPNPGM MPAPRKKELGGSNSNSNKELHMFVWSSSASPVSEANLRNAVNHAASTDFASAPPPAAV PVGGATPKGVSGSVTPAAKNGGGELEIEDGLKSPAAGLAAKFPVSGSPYVAPRKKGGG ADVPGLAEAAHPMPPTSVMTRLILIMVWRKLIRNPNTYSSLIGLVWSLVSFRWNIQMP SIIKGSISILSDAGLGMAMFSLGLFMALQPKIISCGKTVATFAMAVRFLTGPAVIAAT SIAIGLRGVLLHVAIVQAALPQGIVPFVFAKEYNCHPQILSTAVIFGMLIALPITILY YVLLGI" BASE COUNT 448 a 721 c 658 g 449 t ORIGIN 1 gaattagctc gttctcttgt gtcaagaaaa aaaaagaaag aaaaagctcg ccgccgccgc 61 caccgtcgcc ggcgcgatga tcaccggacg cgacatctac gacgtgctgg cggcgatcgt 121 gccgctgtac gtggcgatgt tcctggcgta cgggtcggtg cggtggtggg ggatattcac 181 gccggaccag tgctccggca tcaaccgctt cgtcgccgtc ttcgccgtgc cgctcctctc 241 cttccacttc atctccacca acgaccccta ctccatgaac taccgcttcc tcgccgccga 301 ctcgctccag aagctcgtca tcctcgccgc gctcgccgtc tggcacaacc tgctctcccg 361 ctaccgccgc aatggcggcg ccgccgcgtc gctcgactgg accatcaccc tcttctcgct 421 gtccacgctg cccaacacgc tggtcatggg catcccgctg ctccgcgcca tgtacggcga 481 cttctccggc tcgctcatgg tgcagatcgt cgtgctccag agcgtcatct ggtacaccct 541 catgctcttc ctcttcgagt accgcggcgc caaggcgctc atctccgagc agttcccgcc 601 ggacgtcggc gccagcatcg cctcgttccg cgtcgactcc gacgtcgtct cgctcaacgg 661 gagggaggcg ctgcaggcgg acgccgaggt ggggcgcgac ggccgcgtcc acgtcgtcat 721 ccgccgctcc gcctcggcct ccaccacggg cggcggcggc ggcgcggcgc gctccggcgt 781 gtcccgggcg tacggcgcgt ccaacgccat gacgccgcgc gcctccaacc tcaccggcgt 841 ggagatctac tcgctgcaga cgtcgcgcga gcccacgccg cgggcgtcca gcttcaacca 901 ggccgacttc tacgccatgt tctccggcag caagatggcc agccagatgg ctagccccat 961 ggcgcagcac ggcggcgccg gcggccgcgc ccagggcctc gacgagcagg tcaccaacaa 1021 gttcgcctcc ggcaaggccg ccgacccgcc gtcgtatccc gccccgaacc ccggcatgat 1081 gccggcgcca aggaagaagg agctcggggg ctcaaactcc aactccaaca aggagctaca 1141 catgttcgtg tggagctcta gcgcgtcgcc ggtgtcggag gccaacctcc gcaacgccgt 1201 caaccacgcc gcctccaccg acttcgcctc cgcgccgccg ccggcagccg ttcccgtcgg 1261 cggcgccact cccaaagggg tgagtggcag tgtcacgccg gcggcgaaga acggcggcgg 1321 cgagttggag atcgaggacg ggctgaagag cccggcggcg gggctggcgg cgaagttccc 1381 ggtgtcgggg tcgccgtacg tggcgccgag gaagaagggc ggcggcgccg acgtgcccgg 1441 gctggcggag gcggcgcacc cgatgccgcc gacgagcgtg atgacgcggc tcatcctcat 1501 catggtgtgg cgcaagctca tcagaaaccc caacacctac tccagcctca tcggcctcgt 1561 ctggtccctc gtctccttca ggtggaatat ccaaatgcct tcaataataa agggctcaat 1621 atcaatattg tcagatgcag ggctaggaat ggctatgttc agcttaggct tgttcatggc 1681 tctgcaacca aagatcattt cttgtggcaa gaccgttgcg acatttgcaa tggcagtgag 1741 gttcttgact ggtccagctg ttattgcagc tacttccatt gccattgggc tcaggggagt 1801 actcttgcat gttgccattg ttcaggcagc acttccacaa ggcattgtcc cgtttgtgtt 1861 tgccaaggag tacaattgcc atcctcaaat acttagcaca gcggttattt ttgggatgct 1921 catcgcgctt ccgatcacga tactctacta tgtgcttctt gggatatagt gttcttgaag 1981 aaggcaaaaa agaaagagta gggaaaaaaa taggattcta ggtttctaga ggaaaatgca 2041 aaagaaatat gatatgggct ttcttgaaga cctgaagaac taccagagct gaagaatagg 2101 gaaatgagat caagtaggat cctagctaga gagaaatgca aaggaaagac accccttgat 2161 tacaattttt taattttttc tgcaactgtt ttggcatcaa agtaaaggtt agggccttga 2221 gtatgaagag ttcagccgtt aatttgacaa gttgggttgg cggtactaaa gattcc //