LOCUS       AK101191                2276 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:J033030G03, full insert
            sequence.
ACCESSION   AK101191
VERSION     AK101191.1
KEYWORDS    CAP trapper; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 2276)
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K.,
            Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M.,
            Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C.,
            Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K.,
            Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y.,
            Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M.,
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S.,
            Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K.,
            Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A.,
            Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-AUG-2002) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 28K full-length cDNA clones from japonica
            rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
            Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
            Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
            Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.
            and Yamamoto,M.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
            Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
            Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
            Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
            Yoshimura,A., Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences Center
            and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
            Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
            Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
            Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
            Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
            Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
            Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
            Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
            Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
            Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..2276
                     /clone="J033030G03"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     CDS             77..1969
                     /db_xref="Osa1:LOC_Os06g44970"
                     /db_xref="RAP-DB:Os06g0660200"
                     /note="(RAP Annotation release2) Similar to Auxin efflux
                     carrier protein"
                     /note="(Rice Genome Annotation Project) auxin efflux
                     carrier component 2, putative, expressed"
                     /note="mapping to R06-TIGRv4S1-000915F (Chr.6: short
                     arm=27199810, long arm=27203614, direction=forward) for
                     TIGR Pseudomol ver4"
                     /protein_id="BAG94949.1"
                     /translation="MITGRDIYDVLAAIVPLYVAMFLAYGSVRWWGIFTPDQCSGINR
                     FVAVFAVPLLSFHFISTNDPYSMNYRFLAADSLQKLVILAALAVWHNLLSRYRRNGGA
                     AASLDWTITLFSLSTLPNTLVMGIPLLRAMYGDFSGSLMVQIVVLQSVIWYTLMLFLF
                     EYRGAKALISEQFPPDVGASIASFRVDSDVVSLNGREALQADAEVGRDGRVHVVIRRS
                     ASASTTGGGGGAARSGVSRAYGASNAMTPRASNLTGVEIYSLQTSREPTPRASSFNQA
                     DFYAMFSGSKMASQMASPMAQHGGAGGRAQGLDEQVTNKFASGKAADPPSYPAPNPGM
                     MPAPRKKELGGSNSNSNKELHMFVWSSSASPVSEANLRNAVNHAASTDFASAPPPAAV
                     PVGGATPKGVSGSVTPAAKNGGGELEIEDGLKSPAAGLAAKFPVSGSPYVAPRKKGGG
                     ADVPGLAEAAHPMPPTSVMTRLILIMVWRKLIRNPNTYSSLIGLVWSLVSFRWNIQMP
                     SIIKGSISILSDAGLGMAMFSLGLFMALQPKIISCGKTVATFAMAVRFLTGPAVIAAT
                     SIAIGLRGVLLHVAIVQAALPQGIVPFVFAKEYNCHPQILSTAVIFGMLIALPITILY
                     YVLLGI"
BASE COUNT          448 a          721 c          658 g          449 t
ORIGIN      
        1 gaattagctc gttctcttgt gtcaagaaaa aaaaagaaag aaaaagctcg ccgccgccgc
       61 caccgtcgcc ggcgcgatga tcaccggacg cgacatctac gacgtgctgg cggcgatcgt
      121 gccgctgtac gtggcgatgt tcctggcgta cgggtcggtg cggtggtggg ggatattcac
      181 gccggaccag tgctccggca tcaaccgctt cgtcgccgtc ttcgccgtgc cgctcctctc
      241 cttccacttc atctccacca acgaccccta ctccatgaac taccgcttcc tcgccgccga
      301 ctcgctccag aagctcgtca tcctcgccgc gctcgccgtc tggcacaacc tgctctcccg
      361 ctaccgccgc aatggcggcg ccgccgcgtc gctcgactgg accatcaccc tcttctcgct
      421 gtccacgctg cccaacacgc tggtcatggg catcccgctg ctccgcgcca tgtacggcga
      481 cttctccggc tcgctcatgg tgcagatcgt cgtgctccag agcgtcatct ggtacaccct
      541 catgctcttc ctcttcgagt accgcggcgc caaggcgctc atctccgagc agttcccgcc
      601 ggacgtcggc gccagcatcg cctcgttccg cgtcgactcc gacgtcgtct cgctcaacgg
      661 gagggaggcg ctgcaggcgg acgccgaggt ggggcgcgac ggccgcgtcc acgtcgtcat
      721 ccgccgctcc gcctcggcct ccaccacggg cggcggcggc ggcgcggcgc gctccggcgt
      781 gtcccgggcg tacggcgcgt ccaacgccat gacgccgcgc gcctccaacc tcaccggcgt
      841 ggagatctac tcgctgcaga cgtcgcgcga gcccacgccg cgggcgtcca gcttcaacca
      901 ggccgacttc tacgccatgt tctccggcag caagatggcc agccagatgg ctagccccat
      961 ggcgcagcac ggcggcgccg gcggccgcgc ccagggcctc gacgagcagg tcaccaacaa
     1021 gttcgcctcc ggcaaggccg ccgacccgcc gtcgtatccc gccccgaacc ccggcatgat
     1081 gccggcgcca aggaagaagg agctcggggg ctcaaactcc aactccaaca aggagctaca
     1141 catgttcgtg tggagctcta gcgcgtcgcc ggtgtcggag gccaacctcc gcaacgccgt
     1201 caaccacgcc gcctccaccg acttcgcctc cgcgccgccg ccggcagccg ttcccgtcgg
     1261 cggcgccact cccaaagggg tgagtggcag tgtcacgccg gcggcgaaga acggcggcgg
     1321 cgagttggag atcgaggacg ggctgaagag cccggcggcg gggctggcgg cgaagttccc
     1381 ggtgtcgggg tcgccgtacg tggcgccgag gaagaagggc ggcggcgccg acgtgcccgg
     1441 gctggcggag gcggcgcacc cgatgccgcc gacgagcgtg atgacgcggc tcatcctcat
     1501 catggtgtgg cgcaagctca tcagaaaccc caacacctac tccagcctca tcggcctcgt
     1561 ctggtccctc gtctccttca ggtggaatat ccaaatgcct tcaataataa agggctcaat
     1621 atcaatattg tcagatgcag ggctaggaat ggctatgttc agcttaggct tgttcatggc
     1681 tctgcaacca aagatcattt cttgtggcaa gaccgttgcg acatttgcaa tggcagtgag
     1741 gttcttgact ggtccagctg ttattgcagc tacttccatt gccattgggc tcaggggagt
     1801 actcttgcat gttgccattg ttcaggcagc acttccacaa ggcattgtcc cgtttgtgtt
     1861 tgccaaggag tacaattgcc atcctcaaat acttagcaca gcggttattt ttgggatgct
     1921 catcgcgctt ccgatcacga tactctacta tgtgcttctt gggatatagt gttcttgaag
     1981 aaggcaaaaa agaaagagta gggaaaaaaa taggattcta ggtttctaga ggaaaatgca
     2041 aaagaaatat gatatgggct ttcttgaaga cctgaagaac taccagagct gaagaatagg
     2101 gaaatgagat caagtaggat cctagctaga gagaaatgca aaggaaagac accccttgat
     2161 tacaattttt taattttttc tgcaactgtt ttggcatcaa agtaaaggtt agggccttga
     2221 gtatgaagag ttcagccgtt aatttgacaa gttgggttgg cggtactaaa gattcc
//