LOCUS       AK099874                1523 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:J013111G22, full insert
            sequence.
ACCESSION   AK099874
VERSION     AK099874.1
KEYWORDS    CAP trapper; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 1523)
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K.,
            Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M.,
            Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C.,
            Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K.,
            Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y.,
            Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M.,
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S.,
            Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K.,
            Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A.,
            Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-AUG-2002) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 28K full-length cDNA clones from japonica
            rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
            Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
            Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
            Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.
            and Yamamoto,M.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
            Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
            Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
            Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
            Yoshimura,A., Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences Center
            and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
            Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
            Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
            Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
            Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
            Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
            Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
            Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
            Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
            Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..1523
                     /clone="J013111G22"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     CDS             73..1353
                     /db_xref="Osa1:LOC_Os08g29370"
                     /db_xref="RAP-DB:Os08g0382400"
                     /note="(RAP Annotation release2) Peptidyl-prolyl
                     cis-trans isomerase, cyclophilin type domain containing
                     protein"
                     /note="(Rice Genome Annotation Project) peptidyl-prolyl
                     cis-trans isomerase, chloroplast precursor, putative,
                     expressed"
                     /note="mapping to R08-TIGRv4S1-000535F (Chr.8: short
                     arm=17887238, long arm=17891028, direction=forward) for
                     TIGR Pseudomol ver4"
                     /protein_id="BAG94332.1"
                     /translation="MAAALAFPTCCCCRRPSLRPSAGRRGRRPVARCALPSSENSFSW
                     KEYAISVALSAGLITGAPTLGWPAHASPLEPVIPDVSVLISGPPIKDPGALLRYALPI
                     DNKAVREVQKPLEDITDSLKIAGVRALDSVERNVRQASRALSNGRNLILGGLAESKRA
                     NGEELLDKLAVGLDELQRIVEDRNRDAVAPKQKELLQYVGTVEEDMVDGFPYEVPEEY
                     SSMPLLKGRATVDMKVKIKDNPNLEDCVFRIVLDGYNAPVTAGNFLDLVERKFYDGME
                     IQRADGFVVQTGDPEGPAEGFIDPSTGKVRTIPLELMVDGDKAPVYGETLEELGRYKA
                     QTKLPFNAFGTMAMARDEFDDNSASSQIFWLLKESELTPSNANILDGRYAVFGYVTEN
                     EDYLADLKVGDVIESIQVVSGLDNLANPSYKIVG"
BASE COUNT          402 a          334 c          358 g          429 t
ORIGIN      
        1 gattttccca cctccacctc cacctccccc ttcccttctc gccaatctca cttcatcctc
       61 ctcctcccat caatggcggc ggcgctcgcg ttccccacct gctgctgctg ccgccgcccc
      121 tcgctgcgtc cttccgcggg tcgccgcggc cgtcgccccg tcgcccgctg cgcgctcccc
      181 tcctccgaga attcatttag ctggaaagaa tatgcaattt ctgtagcatt atcggctgga
      241 ttaatcactg gcgcaccaac gttaggatgg ccagcacatg cttctcctct tgaaccagtg
      301 atcccagatg tttcagtttt gatctctgga cctcccatta aagatcctgg tgctttattg
      361 agatatgctt tgccaataga taataaagct gttcgtgaag ttcaaaaacc actagaggat
      421 atcactgaca gtcttaagat tgctggtgtt agagccttgg attcagttga aagaaatgta
      481 agacaagcat cgagggcact gagtaatggg aggaacctaa ttcttggcgg tcttgctgaa
      541 tccaaaagag caaatgggga ggaattattg gataaattgg ctgttggact tgatgagctt
      601 caacggattg ttgaggacag aaacagggat gcagtagctc caaagcagaa agaacttctc
      661 cagtatgttg gaactgtaga agaagatatg gtcgatggat tcccctatga agtgccagaa
      721 gaatacagca gcatgcctct tctcaaagga agggctaccg tggacatgaa ggttaagatt
      781 aaggacaatc ctaatttaga ggattgcgta tttcggattg ttctggatgg atacaatgct
      841 cctgtgactg ctgggaactt cttagatctg gtggaacgga agttctatga tggcatggaa
      901 attcaaagag ctgatggttt tgttgttcaa actggcgatc ctgagggacc agctgaggga
      961 tttattgatc ccagtactgg taaagttcgt acaatacctc ttgagttaat ggtcgatggt
     1021 gacaaagcgc ctgtatatgg tgaaacactt gaagaacttg gccgctacaa ggctcaaaca
     1081 aagcttcctt ttaatgcatt tggaacaatg gcaatggcta gagatgaatt tgatgacaat
     1141 tctgcttcta gccaaatctt ttggttgtta aaagagagtg agctaacacc aagcaatgcc
     1201 aatatactgg atgggcggta tgccgtattt ggatatgtca ccgagaacga ggactacttg
     1261 gcagacctca aggttgggga tgtcattgaa tcgattcaag ttgtctcagg cttagacaac
     1321 ctcgccaacc caagctataa gattgtagga taaaatgttt ctttttttca ggagttcctt
     1381 gataggcaat tattttacca tattgaaatc agtgtaaagt gctataatct ctaaccctca
     1441 tctcatgacc ttctatgttt tgtgagtttt gcaatatgcg ggattcaata ttacttgaaa
     1501 gtaaagacgt tcatcatttg tct
//