LOCUS AK099472 2364 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:J013024B05, full insert sequence. ACCESSION AK099472 VERSION AK099472.1 KEYWORDS CAP trapper; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 2364) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (27-AUG-2002) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..2364 /clone="J013024B05" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" CDS 128..1906 /db_xref="Osa1:LOC_Os05g49140" /note="(Rice Genome Annotation Project) OsMPK20-5 - putative MAPK based on amino acid sequence homology, expressed" /note="mapping to R05-TIGRv4S1-001073R (Chr.5: short arm=28105620, long arm=28110750, direction=reverse) for TIGR Pseudomol ver4" /protein_id="BAG94144.1" /translation="MPEANAGGRAAPAAEQRSKNTTEMDFFSEYGDSSRYKIQEIVGK GSYGVVCSAIDQHTGDKVAIKKIHNIFEHLSDAARILREIKLLRLLRHPDIVEIKHIM LPPSRRDFKDIYVVFELMDTDLHQVIKANDDLTKEHHQFFLYQMLRALKYIHTANVYH RDLKPKNILANANCKLKICDFGLARVAFNDTPTTVFWTDYVATRWYRAPELCGSFFSK YSPAIDTWSIGCIFAEILTGKPLFPGKNVVHQLDLMTDLLGTPSMDAISRIRNDKARR YLSSMRRKQPVPFSEKFPNVDPLALKLLQRLLAFDPKDRPTAEEALADPYFKGLAKVE REPSCQPISKMEFEFERRKVTKDDIKELIFREILEYHPQLLKDYMNGSENTSFLYPSA VDNFRRQFAILEENGGKSGALDRKHVSLPRATTVHSTSIPPNEGLDATSQVTQRIPTA RPGRTVGPVLPFENPGAADPHSARRVVRNPMVPPAAANKSGYSYNLKSDYSDRQHQEE LEKDRVQYRPAQHLMDAKVAPDTAPDIRSSQYYFTRSAPRTDLTDRAALQGSMLYGIA PFNGIAAVAGGYSKVGAVQYGVSRMY" BASE COUNT 670 a 498 c 579 g 617 t ORIGIN 1 ggcaccgcta cactactcgg ctcggctgct tcttcttctc cttctcctca tcctccacat 61 cgctgcggat tcgagcggcg aggcttggat tttctcccgg cgagatctcc ccggcggccg 121 tctcgcgatg cctgaggcaa atgcgggtgg gcgggcggcg ccggcggcgg agcagcggag 181 caagaacaca acagagatgg atttcttcag tgaatatggt gactccagcc gatacaaaat 241 tcaagaaatc gttggtaaag gaagttatgg agttgtttgt tcagctattg accaacatac 301 cggtgacaaa gtagcaatca agaaaataca caatatcttt gagcatctat ctgatgctgc 361 taggatcctc cgtgagatca aacttctccg gcttttacgg catcctgata ttgtcgagat 421 caaacatata atgttacctc catctagaag ggacttcaaa gatatttatg ttgtcttcga 481 actgatggat acagacctcc accaggttat taaggctaat gatgacttaa cgaaggaaca 541 tcatcagttc tttctgtatc aaatgcttcg agcattgaaa tatatccata ctgctaatgt 601 ttatcatcgt gatttaaagc ccaaaaatat attagcaaat gctaactgta agctcaagat 661 atgtgatttt ggactagcaa gagttgcatt taatgacact cctacaacag ttttctggac 721 ggactacgtt gcaactagat ggtacagggc tcctgagctg tgtgggtctt tcttttctaa 781 gtattcacca gctatagata catggagtat tggttgcatt tttgcggaga ttttgactgg 841 aaaacctttg ttccctggta aaaatgtggt tcatcaattg gacttgatga ctgatctctt 901 gggtacacca tcaatggatg ctatttcaag gattcggaat gacaaggcaa ggaggtatct 961 gagcagcatg aggaggaagc agccagtacc tttttcagaa aagttcccaa atgtagatcc 1021 tttggcactc aagctcttac aaaggcttct agcatttgat ccgaaggatc gacctactgc 1081 agaagaggcg ttggctgatc catattttaa aggccttgca aaagtggaga gagaaccatc 1141 atgccaacca atttcaaaaa tggagtttga gtttgagcga agaaaggtta ccaaagatga 1201 tatcaaggaa cttatattcc gtgagatatt agagtatcat cctcagcttc tgaaggatta 1261 catgaatggc tccgaaaaca cgagctttct atatccaagt gctgttgata atttccggag 1321 gcaatttgcc atcttagagg aaaacggagg aaagagtggt gcactagata ggaagcatgt 1381 ttctcttcca agggctacaa cagttcactc tacatcaatt cctccaaatg aaggcctaga 1441 tgcaacatcc caagttactc aaaggatccc aacagctaga ccaggaagaa cggttggtcc 1501 ggtattacca ttcgagaatc caggcgccgc agatccgcac agcgcacgga gggtggtgag 1561 gaatccgatg gttcctccag cagctgccaa caagtcagga tacagctaca acctaaagtc 1621 agactactct gataggcaac atcaggaaga gcttgagaaa gatcgtgtgc agtacaggcc 1681 tgcacaacac ttgatggatg ctaaagttgc tccagataca gccccggaca tacggtcttc 1741 acaatactac tttacgagga gtgctcccag aactgatcta acagacaggg ctgcactcca 1801 ggggagcatg ctatacggca ttgctccgtt caacggcatc gcagcagttg ctggtggata 1861 cagcaaggtt ggtgccgttc aatatggtgt ttcaaggatg tactagagtt ttagtcaggc 1921 agttgtggaa ttgctccata gatgagcaag atgggaatgc cggagcatgg ctttgtgttg 1981 tgcccatcca cccagatata aggctggcaa gggaattggt cgcatctggt catggatgca 2041 ggcgaaggtt gaagaaagga gaagggaaac tcctattcca tctcaggcgg ccattgtcca 2101 tttgaaatgg cagtgagctc gcgatggtga aagaggaaaa gagggagaga aagttcatgg 2161 tggaatttct cgcactttat ttgttgtgga gaaaaggaga aaatgtgaat aacagcacta 2221 ggctgggctt gtgtacatac ctgcaaccct tgattttttt ttcttgtttt cttgctagaa 2281 gctgttgctt cttgtgtaaa cctgcaaaag catactccga aaatgaatca ttcgccaaaa 2341 aattgagacg gcggattatt tggt //