LOCUS AK073100 1633 bp mRNA linear PLN 04-DEC-2008
DEFINITION Oryza sativa Japonica Group cDNA clone:J033016K09, full insert
sequence.
ACCESSION AK073100
VERSION AK073100.1
KEYWORDS CAP trapper; FLI_CDNA.
SOURCE Oryza sativa Japonica Group (Japanese rice)
ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE 1 (bases 1 to 1633)
AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K.,
Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M.,
Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C.,
Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K.,
Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y.,
Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M.,
Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S.,
Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K.,
Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A.,
Yazaki,J., Yokomizo,S. and Yoshimura,A.
TITLE Direct Submission
JOURNAL Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Shoshi Kikuchi
National Institute of Agrobiological Sciences, Department of
Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE 2
AUTHORS The Rice Full-Length cDNA Consortium, National Institute of
Agrobiological Sciences Rice Full-Length cDNA Project Team:,
Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
International Science Genome Sequencing & Analysis Group:,
Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
from japonica Rice
JOURNAL Science 301, 376-379 (2003)
COMMENT This clone is one of the 28K full-length cDNA clones from japonica
rice.
URL : http://cdna01.dna.affrc.go.jp/cDNA/
NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.
and Yamamoto,M.
FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
Yoshimura,A., Matsubara,K. and Murakami,K.
Genome Exploration Research Group in Riken Genomic Sciences Center
and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
Yasunishi,A. and Hayashizaki,Y.
FEATURES Location/Qualifiers
source 1..1633
/clone="J033016K09"
/cultivar="Nipponbare"
/db_xref="taxon:39947"
/mol_type="mRNA"
/organism="Oryza sativa Japonica Group"
misc_feature 1..1633
/db_xref="Osa1:LOC_Os02g47060"
/db_xref="RAP-DB:Os02g0698800"
/note="(RAP Annotation release2) WRKY transcription
factor 66"
/note="(Rice Genome Annotation Project) OsWRKY66 -
Superfamily of rice TFs having WRKY and zinc finger
domains, expressed"
/note="mapping to R02-TIGRv4S1-001201F (Chr.2: short
arm=28720912, long arm=28725064, direction=forward) for
TIGR Pseudomol ver4"
BASE COUNT 324 a 486 c 555 g 268 t
ORIGIN
1 tgcgagcgtc agagagagag agagagagag gaggtggtgg tggtggtcag atcatcatgt
61 gtgattactt cttgcaacgg atagaggggg agcaggccgc cggagacctc gccgacatcg
121 tcctccgcgc cggcggggct gctgctgctg ctgttgcggg cggcggcatc ccgtcgacgg
181 agtggcagct accaccggcg gaggaggagg aggaagagcc gggtctcttc ccgctgccgc
241 cgtcgtcgtc ggatggctcc ggcatgagcg gcgcggatgc gttcggcgac ccgttcgctg
301 gcctccccga ccccttcggt ggcgactacc cctcctctgg cggagcggcg gcggccgccg
361 acttctttga cgccgtcgtg gccaaggccg ggttcgtcga cgtcggtgtc ctcggtggcg
421 gcggcggcgg tggctgcgat ggaggtggcg ttgatggtgg tggaggaggg tcgtcgctgc
481 tgggcatgag caagcctatc ttgcctaggg ccgccatgca gttgccgtcg gtgtcgccga
541 gggcgatacg gccgtacccc gtgatggcct gtgacacggt gaagctcggc gcgccgatgg
601 ccggcgggcc gtgcgcgttc gacggcgccg ccgcggcagg gctgcacatg tcgtcgtcgc
661 cgcgtggcgc cgtcggcggg atcaagcgca ggaagaacca ggctaggaag gtggtgtgca
721 tcccagcgcc tgcagcagca ggagggagga ccagtgggga ggttgttcct tccgatctct
781 gggcttggag gaagtatggc cagaagccta tcaaaggctc tccttaccca agagggtact
841 acagatgcag cagctcgaaa ggatgctcgg cgcgcaagca ggtggagcgc agccggaccg
901 accccaacat gctcgtcatc acctacacgt cggagcacaa ccacccgtgg ccgacgcagc
961 gcaacgcgct cgccggctcc acgcggtctc atcacgccaa gaacagcagc agcaacagca
1021 gcagcagcgg cgcctcctca gcctccaaga acaactcctc ccacagcggt taccaccacc
1081 accaccacca gaagccactc gtcaaggcgg aacccaacga tcaatccgcc gccgccacga
1141 ccgccgccac ggtgccggtg aaagaggagg ccgccatggt agggacgtcg tcggaagcat
1201 tggcgaagac gacgcagaaa tccatggagg atgctgctgc tgctgcttca gccacggcgg
1261 cggcggtgga gcacagtgat ctcatgcagc agatgttcag ccagagctac cggccgatga
1321 taccggaggc agcggccggc ggccaccacg acgacttctt cgccgacctc gccgagttgg
1381 agtcagatcc catgagcctg atcttctcca aggagtacat ggcgaccaat tacaagccag
1441 caggtgaccc agcaggcaag gagatgaatg cagtagacaa gggcttggat ccagcgtaca
1501 tgctggattg gtcttctacc actgttgtta ctagagctgg tgggagctca tttatgcaag
1561 gggagggagg tttatgacat tttaatcact ttgaaacaaa aggcaaaagc tagtatatgc
1621 gaatgcaaac acc
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