LOCUS AK072472 2731 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:J023119J10, full insert sequence. ACCESSION AK072472 VERSION AK072472.1 KEYWORDS CAP trapper; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 2731) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..2731 /clone="J023119J10" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" CDS 66..2285 /db_xref="Osa1:LOC_Os08g39950" /db_xref="RAP-DB:Os08g0510300" /note="(RAP Annotation release2) K+ potassium transporter family protein" /note="(Rice Genome Annotation Project) potassium transporter 17, putative, expressed" /note="mapping to R08-TIGRv4S1-000847F (Chr.8: short arm=25180700, long arm=25185728, direction=forward) for TIGR Pseudomol ver4" /protein_id="BAG92986.1" /translation="MEYHHRPHSPPPSDDDVVVIQMNAAAIAAVDEWSSTNEVDDAAA GKGGGLTRRTFSQAYKMKHRTPLEFTWRQVALLSFQSLGVVYGDLGTSPLYVFSSISL DDPGEADFVGILSIILWTFTMICLVKYVFIVLKADDHGEGGTFALYSLLRQHVNFKGN MPVPVTHLASDINLKFHSKKRILTSKLLKFLEQSTKWQAVITYIVLAGTCMVLGDGAL TPAISVLSAVQGIQSRSSSITQAHVVLLSVIILFILFFFQKHGTSKVSFTFSPIMILW FTFVAFIGLYNIIKHYPPILKAVSPHYIIIYFIRNKRAAWETLGAIVLCITGAEAMFA DLGHFNKSSIQMAFSVIVYPSMILAYAGQAAFLVKNPSKLSTTFYSSTPEPLFWPMFI IATLAAIVASQALISASFSIIRQSIALGCFPRVTMKHTSGKHEGQVYSPEINYFLMVA CILITVGFKGGPEIGQAFGVAVIFVMLFTTNLMTVVMLIIWESNIALASLFFVFFFSI EGIYMTSLMNKILQGGWVPFAITAFFLIITLSWTYGRSKKGEYELANVMEREEFIKTV TTRSRVPGVCIFCTDMMNGIPPIVRHYVQHVASLRELMVFVTIRVLPVRTVLPEERFI IDKLEPVGVYRCIVQYGYMDNHNMEGDDYVASVIASLKEIAENDDEILVLDSALINGS TFVLGRTIIKMGTRHNCLKRFFINNLYRFLQKNFRSNMSSLKINPGKTLQVGMLYEI" BASE COUNT 717 a 606 c 620 g 788 t ORIGIN 1 ggttgctata gctaggtcaa atcgatcgat ctcgatcgat cgggtggtcg atccgatcag 61 cagccatgga gtaccaccac cggccgcatt cgccgccgcc gtcggacgac gacgtcgtcg 121 tcatccagat gaacgccgcc gccatcgccg ccgtcgacga gtggagctcc accaacgagg 181 tggacgacgc cgccgccggc aagggcggcg gcctcacccg ccggaccttc agccaggcct 241 acaagatgaa gcaccggacg ccactggagt tcacgtggag gcaggtggcg ttgctgagct 301 tccagtcgct gggggtggtg tacggagacc tggggacgtc gccgctgtac gtgttctcgt 361 cgatctcgct ggacgacccc ggcgaggcgg acttcgtcgg aatcctcagc atcatcctct 421 ggaccttcac catgatctgc ctcgtcaagt acgtcttcat cgtcctcaaa gctgacgacc 481 atggagaagg tggcactttt gcgctgtact cgcttctgcg tcagcatgtg aatttcaagg 541 gaaacatgcc agtgccagtc acacacttgg catctgacat caacctcaag ttccacagta 601 agaagaggat tctgacgtcc aagctcctca agttcttgga acaaagcaca aaatggcagg 661 cagtcattac ctacatcgtg cttgctggga cttgcatggt gctaggagat ggtgccctca 721 ctccagccat ctcagttctg tcagctgttc aaggaatcca atcaagatct tcaagcataa 781 cacaagctca tgttgtgttg ctatctgtga ttatcttgtt catactattc ttcttccaaa 841 aacatggcac aagcaaagtc agcttcactt tttctcccat tatgatcttg tggtttacat 901 tcgttgcatt cattggattg tacaatatca tcaagcacta tccaccaatt ctgaaagctg 961 tgtcgcccca ttacataatc atatacttca taaggaacaa aagagcggcc tgggagacac 1021 ttggagcaat tgttctatgc ataacaggtg ctgaagctat gtttgctgac ttgggtcatt 1081 tcaacaaatc atcaatccag atggcatttt cagtcatagt ttatccatca atgatccttg 1141 cgtatgccgg gcaggcagca tttttggtca agaacccttc aaagctcagc acgacgttct 1201 acagtagtac tccagagcca ctattttggc ccatgtttat catagcaact ttggctgcta 1261 ttgttgcgag ccaagcattg atatcagcca gcttctccat cattcgacaa tcaattgctt 1321 tgggttgttt tccaagagtt accatgaagc atacctcagg caaacatgaa ggccaagtat 1381 actctccaga gatcaattac tttttgatgg ttgcgtgcat cttaattact gttgggttta 1441 agggtggacc agagataggg caagcctttg gcgtggcagt gatatttgtt atgcttttta 1501 caacaaacct gatgacagtg gtcatgctta taatatggga aagtaacatt gcacttgcca 1561 gtctattttt tgtttttttc ttttccatcg aaggcattta catgacctcg ttaatgaaca 1621 agattctaca aggtggctgg gttccatttg ccattactgc atttttcctg ataattacac 1681 tatcttggac ttatggaaga agtaagaagg gtgaatatga acttgccaat gtgatggaaa 1741 gggaggaatt tattaagaca gtaacaacga gaagccgagt acctggagta tgcatcttct 1801 gcacggatat gatgaatggc atcccgccga ttgtgcgcca ttatgttcag catgtggctt 1861 ccctccgtga actgatggtg tttgtcacta tcagggttct tccggtgaga actgtccttc 1921 ctgaagagcg cttcatcata gacaagctag agccagtggg tgtctacagg tgcatagtcc 1981 aatatggcta tatggacaac cacaatatgg agggtgacga ttacgttgca tcagttattg 2041 catccctcaa ggaaatagct gagaatgatg atgagattct ggtgttggat tcagctttga 2101 taaatggatc aacctttgtt cttggcagga ctatcataaa gatgggaact aggcacaact 2161 gtttgaagcg cttttttatt aataaccttt acaggttctt gcaaaagaac ttcagatcca 2221 acatgtccag tctaaagata aatcctggta aaaccttgca agttggaatg ctatatgaga 2281 tttgaagaag gtgaccaatt gtggatgcat aaatgtgaag tgttagctag aatgctagat 2341 tgctgaaatt ggcagacaga caagtttttc ttgattataa atgtcacaga attgtttgga 2401 tgtgacccat attttcttag catgcaaacc atctgcaata attgtcctgt gagtagatga 2461 ccaagttata tacacttttg ggataatttt attagtggga tgcaattctc tttttttctc 2521 ccctaatatt tcacactcta aactgcacca acttgtaggc tggttagtga atggtaaaga 2581 aaaaatgttg cacagtgtgc aatttatgta cacataccat tctcatttat tttccagttg 2641 tattttgata agatggttat ctaaatcata ttctttggtg aaagtgtaaa cctccttgta 2701 aaacaatata gatcttaatg ttgcaatgct c //