LOCUS AK071557 1411 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:J023099D13, full insert sequence. ACCESSION AK071557 VERSION AK071557.1 KEYWORDS CAP trapper; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 1411) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..1411 /clone="J023099D13" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" CDS 70..1035 /db_xref="Osa1:LOC_Os02g53180" /note="(Rice Genome Annotation Project) 1-aminocyclopropane-1-carboxylate oxidase 1, putative, expressed" /note="mapping to R02-TIGRv4S1-001425F (Chr.2: short arm=32554460, long arm=32556782, direction=forward) for TIGR Pseudomol ver4" /protein_id="BAG92555.1" /translation="MASVASFPVINMENLETEERGAAMEVIRDACENWGFFEMLNHGI AHELMDEVERVSKAHYANCREEKFKEFARRMLEAGEKGADVKGIDWESTFFVRHRPVS NLADLPDVDDHYRQVMKQFASEIEKLSERVLDLLCENLGLEKGYLKKAFAGSNGPTFG TKVSSYPPCPRPDLVDGLRAHTDAGGIILLFQDDQVSGLQLLKDGEWVDVPPMRHAIV ANIGDQLEVITNGRYKSVMHRVLTRPDGNRMSIASFYNPGADAVIFPAPALAAADAAA AAYPRFVFEDYMNLYVRHKFEAKEPRFEAMKSAAEVVHAAPIATA" BASE COUNT 280 a 414 c 439 g 278 t ORIGIN 1 gggacacaca gacgcactca cacattcagc ttaagcgagc gagcgagtga acgagagaga 61 gagacagaga tggcgagtgt tgcctccttc ccggtgatca acatggagaa cctggagacc 121 gaggagaggg gcgcagcaat ggaggtcatc cgcgacgcct gcgagaactg gggcttcttc 181 gagatgctga accatggcat cgcgcacgag ctgatggacg aggtggagcg ggtgagcaag 241 gcgcactacg ccaactgccg ggaggagaag ttcaaggagt tcgcgcggcg gatgctggag 301 gccggcgaga agggcgccga cgtgaagggc atcgactggg agagcacctt cttcgtccgc 361 caccgccccg tctccaacct cgccgacctc cccgacgtcg acgaccacta caggcaggtg 421 atgaagcaat ttgcgtcgga gatcgagaag ctctcggaga gggtgctgga cctgctgtgc 481 gagaatctgg gcctggagaa gggttacctg aagaaggcct tcgccgggtc gaacggccca 541 acgttcggca ccaaggtgag cagctacccg ccgtgcccgc gccccgatct cgtcgacggc 601 ctccgcgccc acaccgacgc cggtggcatc atcctgctgt tccaggacga ccaggtgagc 661 ggcctccagc tgctcaagga cggggagtgg gtggacgtgc cgcccatgcg ccacgccatc 721 gtcgccaaca tcggcgacca gctggaggtg atcaccaacg gcaggtacaa gagcgtcatg 781 caccgcgtcc tcacgcgccc cgacggcaac cgcatgtcca tcgcctcctt ctacaacccc 841 ggcgccgacg ccgtcatctt cccggcgccc gcgctcgccg ccgccgacgc ggcggcggcc 901 gcctacccga ggttcgtgtt cgaggactac atgaacctgt acgtgcgcca caagttcgag 961 gccaaggagc cacgcttcga ggccatgaag tccgccgccg aggtcgtcca cgcggcgccc 1021 atcgccaccg cttgataagg atcagacttc actagctacg gctgcgcgtg ccatgatcca 1081 gatatatggg atgtgtacgg tagtgtacgt ggtgctgtac atgccgtccc gtgtttttct 1141 gcgtaatgtt tttacgtact agactactac tagtgtgtgt acgtaacctg gggatgtaag 1201 tatcgcgtca agtactcaag tgtgtgtaac gggcgctcta atcgtattgt tctgtgcttc 1261 aatggctacc acgttagatg ggccttgtgc taatgttgtt ttatgctact tccgctgtcg 1321 ccttagatgg gccttgttgt ataatgtctc gtcgacacat ctgtgctttt ctgggtgtgt 1381 ttagttgggg aaaatgaaat tcttggctgt c //