LOCUS       AK064566                2339 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:002-112-D04, full insert
            sequence.
ACCESSION   AK064566
VERSION     AK064566.1
KEYWORDS    oligo-capping; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 2339)
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K.,
            Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M.,
            Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C.,
            Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K.,
            Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y.,
            Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M.,
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S.,
            Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K.,
            Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A.,
            Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 28K full-length cDNA clones from japonica
            rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
            Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
            Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
            Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.
            and Yamamoto,M.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
            Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
            Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
            Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
            Yoshimura,A., Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences Center
            and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
            Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
            Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
            Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
            Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
            Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
            Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
            Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
            Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
            Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..2339
                     /clone="002-112-D04"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     misc_feature    1..2339
                     /db_xref="Osa1:LOC_Os07g10390"
                     /db_xref="RAP-DB:Os07g0203700"
                     /note="(RAP Annotation release2) Cytochrome cd1-nitrite
                     reductase-like, C-terminal haem d1 domain containing
                     protein"
                     /note="(Rice Genome Annotation Project) nucleic acid
                     binding protein, putative, expressed"
                     /note="mapping to R07-TIGRv4S1-000220R (Chr.7: short
                     arm=5566013, long arm=5573994, direction=reverse) for
                     TIGR Pseudomol ver4"
BASE COUNT          610 a          483 c          559 g          687 t
ORIGIN      
        1 ggagacttga taattcatct tctagttgtg caacgagtgg tgattttcgg aaagattttg
       61 cagctaatat tcgcaagttt gctgtaattg gaactcacga accttctgtg catatcattt
      121 cgttggaacc tggagaagca tttcagcaac ttgctgttgg gcatatatca gtaaacaacg
      181 cgctcggcac tcctatcagt ggttgtatac ctgaaaatgt taggtttgta gcagctgcaa
      241 ggttctacat tcttgcagga ctaaggaatg gaatgctact gaggtttgag tcacaaacaa
      301 gcaaagggca ttgtttccct ggttcctttt acaaggagtc ctctacccct tgtgatgata
      361 catcccttat gttgattgct gtacggcgta ttggaatcac tcctgtagtt ttggtaccgt
      421 tgcatgacag agccaatgct gacattattg ttctcggtga taggcctcgg ctattgcaat
      481 ctgctagaca cagcttggca cattcatcca tctcatttct gcctgcttcc catgtgacac
      541 cagtgtcttc tactgattgc cccagtggtc tgctgtttgt ttcggagaac tgtttgcatt
      601 tggttgaaat ggttcatggc aaaagactaa atgcacagaa gttttcgatt ggagggactc
      661 caaggaaagt gttataccac agtgatagta gaacactgtt ggtgctgaga actgggttaa
      721 ccagtgtatc ctgttcttca gatattgttc aaatagatcc aagtaatggg gcattgcttt
      781 ccagattcaa gtgcgaacct ggtgaaacag caaaatgcat gcaaattgca aagataggga
      841 atgatcaagt attaatcgtt ggaactagta agtccaatgg ccgaccaatg atgccaaacg
      901 gtgaagcaga aagtatcaag ggtcgtctaa ttcttttaag cttggagact attgaaagtc
      961 ctcgtgagag cggttcgttt actgcagctt ctaatttgaa ttcatctcat gctggttctc
     1021 cattcccgga atttgttgga tatgcagcag aggagctgtc tagtaacagc atgtgcagca
     1081 gtcctgatga agtttgctgc aatcaaattc aacctgaact catggcaggc catttgagat
     1141 cactagtcca acatacattc aatggcgctg ttcttgctgt acatccatat ctagatagat
     1201 atgtgttggc agcagctgga aatgtgcttt ttgtatttgg attttttaaa tgaaagtccc
     1261 catcggataa aaaagtatac tacgagtagg acacgattta caataacctg tttgaagacg
     1321 tatgcatcac ggattgcagt gggtgattgc cgcgatggtg ttctcttcta ttcttatcat
     1381 gagaatctta ggaagttgga actgatctat tctgatcctg cccaacggct agtgggtgat
     1441 gttgcccttt tgagctgtga aactgctgtt gtatcagatc gacgagggag catatctgta
     1501 ctgtcttgcc caagattaga agtatccgaa agtccagaga agaacctagc ggtgcattgt
     1561 tcattttaca tgggtgaaac agctatgagc atccagaagg ttgcatttaa gcattggctt
     1621 ccaattgatg atttgacaga accagtgttg gagtcggtat acaactgtgt cgtcgcaagc
     1681 actctgctgg ggagtatctt tgttatgatt ccactcacaa gtgaggagca tcaaatgttg
     1741 caagatgtcc aagaaagact ttcggttcac ccattgactg ctccactctt aggaaatgat
     1801 catgcagagt ttcgtcgccg tggtatcccg tcgggagtac cgcccattct ggatggcgac
     1861 atgcttgtgc agttcctgga gctcaccagc gaacaacagc acgatgttct caatattgtt
     1921 tctcctggaa agaagaggca acacgatatc tcggttttcc aggtcatgcg agcattagag
     1981 agggtgcatt acgcactcaa ctgaggcgtt caacaatcca ttcaacccgg tcactgttct
     2041 taccgacatg gctgtctcca acctgctgat atttaggtgg catcatcgct gaatttggat
     2101 ccgagccgag caccgagttg ttgcagctga agctgctact ggagcacata cccagaacat
     2161 accaaatctc agctgtagtg aggtgctgtg ttttgctgtg ggatgatagg cccatctgat
     2221 gtcgcaatag tgtgtcattg ctctagtgca atctttgtaa ataacgaata atattttggc
     2281 agaaggatgt ggatacaaat ccttttgccc agtgaaagga acaaccctcg tgaacgcat
//