LOCUS AK061436 1034 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:006-307-B03, full insert sequence. ACCESSION AK061436 VERSION AK061436.1 KEYWORDS oligo-capping; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 1034) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..1034 /clone="006-307-B03" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" CDS 37..744 /db_xref="Osa1:LOC_Os07g07320" /note="(Rice Genome Annotation Project) glutathione S-transferase GSTU6, putative, expressed" /note="mapping to R07-TIGRv4S1-000168F (Chr.7: short arm=3660673, long arm=3661707, direction=forward) for TIGR Pseudomol ver4" /protein_id="BAG87925.1" /translation="MAAGAGGDGGGELKLLGTWASPFVQRVRLALNLKGLAYEFIEEE IGGGKSELLLASNPVHKKVPVLLHRSNPICESQVIVQYLDDAFPGGAAGGDLLPSDPH ARAVARFWAAYIDAEFFAPWNRSFYTASEEEKTAEMGRAAAALATIERAFAELSRGKG FFSGEDRPGFVDVVLGGFVGSMRAYGTAVGVEVLDAGRTPLLVAWAERVAALDAARGV IPDVERVVELSRYARKK" BASE COUNT 175 a 299 c 343 g 217 t ORIGIN 1 acgcacgaat ccagtgacac acagagctag ctagcgatgg cggccggagc cggaggagac 61 ggcggcggcg agctgaagct tctggggacg tgggcgagcc cgttcgtgca gcgggtgcgc 121 ctcgcgctga acctcaaggg cctcgcgtac gagttcatcg aggaggagat cggcggcggc 181 aagagcgagc tcctcctcgc ctccaacccc gtccacaaga aggtccccgt cctcctccac 241 cgcagcaacc ccatctgcga gtcccaggtc atcgtccagt acctcgacga cgccttcccc 301 ggcggcgccg ccggcggcga cctcctcccc tccgaccccc acgcccgcgc cgtcgcccga 361 ttctgggcgg cgtacatcga cgccgagttc ttcgcgccgt ggaacaggtc gttctacacg 421 gcgtcggagg aggagaagac ggcggagatg gggagggcgg cggcggcgct ggcgacgatc 481 gagcgcgcgt tcgcggagct gtcgaggggg aaggggttct tctccggcga ggacaggccg 541 gggttcgtcg acgtggtgct cggcgggttc gtgggctcga tgcgcgcgta cggcacggcg 601 gtcggcgtgg aggtgctcga cgccgggcgc accccgctgc tggtggcgtg ggcggagcgc 661 gtcgcggcgc tcgacgccgc caggggcgtc atccccgacg tcgaacgcgt cgtcgagctc 721 tcgcgctacg cgaggaagaa gtagacacgg taacgatttg tgttgtcctg tggtgtttgt 781 atcgtcaaaa taaatgtggc acaaaggttg tcatcattag tgagcattct tgccggtttc 841 ttctccagtt taagtgtctg tgttgctttt gtttggactg cggggatgtt agaatatatg 901 gtagttagag ttatattaga atggactgat ttgtgtggac ttctttcata tctgtaattc 961 tttcttatct tctccccatg tactcctata tatcggcccc tgaggctcaa tataatgggt 1021 ccaatattca tagt //