LOCUS AK022874 2797 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ12812 fis, clone NT2RP2002498, highly similar
to Homo sapiens component of oligomeric golgi complex 4 (COG4),
mRNA.
ACCESSION AK022874
VERSION AK022874.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2797)
AUTHORS Isogai,T. and Otsuki,T.
TITLE Direct Submission
JOURNAL Submitted (23-AUG-2000) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Isogai,T., Ota,T., Hayashi,K., Sugiyama,T., Otsuki,T., Suzuki,Y.,
Nishikawa,T., Nagai,K., Sugano,S., Takahashi-Fujii,A., Hara,H.,
Tanase,T., Nomura,Y., Togiya,S., Komai,F., Hara,R., Takeuchi,K.,
Arita,M., Nabekura,T., Ishii,S., Kawai,Y., Saito,K., Yamamoto,J.,
Wakamatsu,A., Nakamura,Y., Nagahari,K., Masuho,Y. and Oshima,A.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2000)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
International Trade and Industry of Japan; cDNA full insert
sequencing: Research Association for Biotechnology; cDNA library
construction, 5'- & 3'-end one pass sequencing and clone
selection: Helix Research Institute (supported by Japan Key
Technology Center etc.) and Department of Virology, Institute of
Medical Science, University of Tokyo.
FEATURES Location/Qualifiers
source 1..2797
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP2002498"
/clone_lib="NT2RP2"
/db_xref="H-InvDB:HIT000006148"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
2-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 4..2361
/codon_start=1
/protein_id="BAB14286.1"
/translation="MADLDSPPKLSGVQQPSEGVGGGRCSEISAELIRSLTELQELEA
VYERLCGEEKVVERELDALLEQQNTIESKMVTLHRMGPNLQLIEGDAKQLAGMITFTC
NLAENVSSKVRQLDLAKNRLYQAIQRADDILDLKFCMDGVQTALRSEDYEQAAAHIHR
YLCLDKSVIELSRQGKGGSMIDANLKLLQEAEQRLKAIVAEKFAIATKEGDLPQVERF
FKIFPLLGLHEEGLRRFSEYLCKQVASKAEENLLMVLGTDMSDRRAAVIFADTLTLLF
EGIARIVEAHQPIVETYYGPGRLYTLIKYLQVECDRQVEKVVDKFIKQRDYHQQFRHV
QNNLMRNSTTEKIEPRELDPILTEVTLMNARSELYLRFLKKRISSDFEVGDSMASEEV
KQEHQKCLDKLLNNCLLSCTMQELIGLYVTMEEYFMRETVNKAVALDTYEKGQLTSSM
VDDVFYIVKKCIGRALSSSSIDCLCAMINLATTELESDFRDVLCNKLRMGFPATTFQD
IQRGVTSAVNIMHSSLQQGKFDTKGIESTDEAKMSFLVTLNNVEVCSENISTLKKTLE
SDCTKLFSQGIGGEQAQAKFDGCLSDLAAVSNKFRDLLQEGLTELNSTAIKPQVQPWI
NSFFSVSHNIEEEEFNDYEANDPWVQQFILNLEQQMAEFKASLSPVIYDSLTGLMTSL
VAVELEKVVLKSTFNRLGGLQFDKELRSLIAYLTTVTTWTIRDKFARLSQMATILNLE
RVTEILDYWGPNSGPLTWRLTPAEVRQVLALRIDFRSEDIKRLRL"
BASE COUNT 694 a 718 c 788 g 597 t
ORIGIN
1 aagatggcgg accttgattc gcctccgaag ctgtcagggg tgcagcagcc gtctgagggg
61 gtgggaggtg gccgctgctc cgaaatctcc gctgagctca ttcgctccct gacagagctg
121 caggagctgg aggctgtata cgaacggctc tgcggcgagg agaaagtggt ggagagagag
181 ctggatgctc ttttggaaca gcaaaacacc attgaaagta agatggtcac tctccaccga
241 atgggtccta atctgcagct gattgaggga gatgcaaagc agctggctgg aatgatcacc
301 tttacctgca acctggctga gaatgtgtcc agcaaagttc gtcagcttga cctggccaag
361 aaccgcctct atcaggccat tcagagagct gatgacatct tggacctgaa gttctgcatg
421 gatggagttc agactgcttt gaggagtgaa gattatgagc aggctgcagc acatattcat
481 cgctacttgt gcctggacaa gtcggtcatt gagctcagcc gacagggcaa aggggggagc
541 atgattgatg ccaacctgaa attgctgcag gaagctgagc aacgtctcaa agccattgtg
601 gcagagaagt ttgccattgc caccaaggaa ggtgatttgc cccaggtgga gcgcttcttc
661 aagatcttcc cactgctggg tttgcatgag gagggattaa gaaggttctc ggagtacctt
721 tgcaagcagg tggccagtaa agctgaggag aatctgctca tggtgctggg gacagacatg
781 agtgatcgga gagctgcagt catctttgca gatacactta ctcttctgtt tgaagggatt
841 gcccgcattg tggaggccca ccagccaata gtggagacct attatgggcc agggagactc
901 tataccctga tcaaatatct gcaggtggaa tgtgacagac aggtggagaa ggtggtagac
961 aagttcatca agcaaaggga ctaccaccag cagttccggc atgttcagaa caacctgatg
1021 agaaattcta caacagaaaa aatcgaacca agagaactgg accccatcct gactgaggtc
1081 accctgatga acgcccgcag tgagctatac ttacgcttcc tcaagaagag gattagctct
1141 gattttgagg tgggagactc catggcctca gaggaagtaa agcaagagca ccagaagtgt
1201 ctggacaaac tcctcaataa ctgccttttg agctgtacca tgcaggagct aattggctta
1261 tatgttacca tggaggagta cttcatgagg gagactgtca ataaggctgt ggctctggac
1321 acctatgaga agggccagct gacatccagc atggtggatg atgtcttcta cattgttaag
1381 aagtgcattg ggcgggctct gtccagctcc agcattgact gtctctgtgc catgatcaac
1441 ctcgccacca cagagctgga gtctgacttc agggatgttc tgtgtaataa gctgcggatg
1501 ggctttcctg ccaccacctt ccaggacatc cagcgcgggg tgacaagtgc cgtgaacatc
1561 atgcacagca gcctccagca aggcaaattt gacacaaaag gcatcgagag tactgacgag
1621 gcgaagatgt ccttcctggt gactctgaac aacgtggaag tctgcagtga aaacatctcc
1681 actctgaaga agacactgga gagtgactgc accaagctct tcagccaggg cattggaggg
1741 gagcaggccc aggccaagtt tgacggctgc ctttctgact tggccgccgt gtccaacaaa
1801 ttccgagacc tcttgcagga agggctgacg gagctcaaca gcacagccat caagccacag
1861 gtgcagcctt ggatcaacag ctttttctcc gtctcccaca acatcgagga ggaagaattc
1921 aatgactatg aggccaacga cccttgggta caacagttca tccttaacct ggagcagcaa
1981 atggcagagt tcaaggccag cctgtccccg gtcatctacg acagcctaac cggcctcatg
2041 actagccttg ttgccgtcga gttggagaaa gtggtgctga aatccacctt taaccggctg
2101 ggtggtctgc agtttgacaa ggagctgagg tcgctcattg cctaccttac cacggtgacc
2161 acctggacca tccgagacaa gtttgcccgg ctctcccaga tggccaccat cctcaatctg
2221 gagcgggtga ccgagatcct cgattactgg ggacccaatt ccggcccatt gacgtggcgc
2281 ctcacccctg ctgaagtgcg ccaggtgctg gccctgcgga tagacttccg cagtgaagat
2341 atcaagaggc tgcgcctgta gctgcctgga tgagcacacc tggctcatca cacttgcagg
2401 cctgttccct aaggggcccc agccaaggag ctgagcgagg ctgtctggct tgggggagat
2461 ctgacagccc agacctttct acggctggca gcagagaaac aaagtctgga cccactccat
2521 gctctgccct cagacctggc caggtgatgc tctgggggca gcatctcccc accgagagaa
2581 gcgggctcct aatgaggtgg gaaagccacg gcaggcagcg agcagcccag gccagctttc
2641 tgcatggatg gtcagtctct tgccctcaaa cactacagca aacaagctac ccctgccagt
2701 cctagacaac ttgggtacat ctggggacct agcagttagg cttgactttg aggagaggct
2761 gtgatgttta tgatccctga ataaagctac tccttgg
//