LOCUS       AJ717483                 937 bp    DNA     linear   BCT 26-JUL-2005
DEFINITION  Pseudomonas viridiflava partial rpoB gene for DNA-directed RNA
            polymerase beta chain, strain LMG 2352T.
ACCESSION   AJ717483
VERSION     AJ717483.1
KEYWORDS    DNA-directed RNA polymerase beta chain; rpoB gene.
SOURCE      Pseudomonas viridiflava
  ORGANISM  Pseudomonas viridiflava
            Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
            Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 937)
  AUTHORS   Grimont P.A.D.
  JOURNAL   Submitted (25-MAY-2004) to the INSDC. Grimont P.A.D., Biodiversity
            Emerging Pathogenic Bact., Institut Pasteur, 28 rue du Dr Roux
            75724 Paris Cedex 15, 75724, FRANCE.
REFERENCE   2
  AUTHORS   Ait Tayeb L., Ageron-Ardila E., Grimont F., Grimont P.A.D.
  TITLE     Molecular phylogeny of the genus Pseudomonas based on rpoB
            sequences and application for the identification of isolates
  JOURNAL   Res. Microbiol. 156(5-6), 763-773(2005).
   PUBMED   15950132
FEATURES             Location/Qualifiers
     source          1..937
                     /organism="Pseudomonas viridiflava"
                     /strain="type strain: LMG 2352"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:33069"
     CDS             <1..>937
                     /codon_start=1
                     /transl_table=11
                     /gene="rpoB"
                     /product="DNA-directed RNA polymerase beta chain"
                     /EC_number="2.7.7.6"
                     /db_xref="GOA:Q5ZMY4"
                     /db_xref="InterPro:IPR007120"
                     /db_xref="InterPro:IPR007645"
                     /db_xref="InterPro:IPR015712"
                     /db_xref="InterPro:IPR019462"
                     /db_xref="InterPro:IPR042107"
                     /db_xref="UniProtKB/TrEMBL:Q5ZMY4"
                     /protein_id="CAG30655.1"
                     /translation="SEGLLPKDLINAKPVAAAVKEFFGSSQLSQFMDQNNPLSEITHK
                     RRVSALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLAAYARTNQYG
                     FLESPYRVVKEGLVTDEIVFLSAIEEADHVIARASAAMNDKQELIDELVAVRHLNEFT
                     VKAPADVTLMDVSPKQVVSVAASLIPFLEHDDANRALMGSNMQRQAVPTLRADKPLVG
                     TGMERNVARDSGVCVVARRGGVIDSVDASRIVVRVADDEVETGETSVDIYNLTKYTRS
                     NQNTCINQRPLVSKGDRVQRSDIMADGPSTDMGELA"
BASE COUNT          196 a          278 c          269 g          194 t
ORIGIN      
        1 agcgaaggcc tgttgcctaa ggacctgatc aacgccaagc cagtcgctgc agcggtgaaa
       61 gagttcttcg gttccagcca gctttcccag ttcatggacc agaacaaccc gctgtccgag
      121 atcacccaca agcgtcgtgt ctctgcactc ggccctggcg gtctgactcg tgagcgcgcc
      181 ggctttgaag ttcgagacgt tcacccgact cactacggcc gcgtatgccc gattgaaacg
      241 ccggaaggtc cgaacatcgg tctgatcaac tcgttggcag cctacgctcg caccaaccag
      301 tacggtttcc tcgagagccc gtaccgcgtt gttaaagaag gtctggttac cgacgagatc
      361 gttttcctgt cggcaatcga agaagcggat cacgtcattg cacgggcttc ggccgcaatg
      421 aacgacaagc aagagctgat cgacgagctg gttgcggtac gtcacctcaa cgaatttacg
      481 gtcaaggcac ctgccgacgt taccctgatg gacgtttcgc ccaagcaggt tgtatcggta
      541 gcagcgtccc tgatcccgtt ccttgagcac gacgacgcca accgtgcgtt gatgggttcc
      601 aacatgcagc gtcaggctgt acctacactg cgtgctgaca agccgctggt tggtaccggc
      661 atggagcgca acgttgcgcg tgactccggc gtttgcgtcg tggctcgtcg tggcggtgtg
      721 atcgactcgg ttgatgccag ccgtatcgtg gttcgtgttg ctgacgacga agttgagaca
      781 ggtgagacca gtgtagacat ctacaacctg accaaataca cccgttccaa ccagaacacc
      841 tgcatcaacc agcgtccgct ggtgagcaag ggtgatcgcg ttcagcgcag cgacatcatg
      901 gccgatggtc cgtccaccga catgggtgag ctggcac
//