LOCUS AJ717444 1145 bp DNA linear BCT 26-JUL-2005 DEFINITION Pseudomonas fragi partial rpoB gene for DNA-directed RNA polymerase beta chain, strain LMG 2191T. ACCESSION AJ717444 VERSION AJ717444.1 KEYWORDS DNA-directed RNA polymerase beta chain; rpoB gene. SOURCE Pseudomonas fragi ORGANISM Pseudomonas fragi Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas. REFERENCE 1 (bases 1 to 1145) AUTHORS Grimont P.A.D. JOURNAL Submitted (25-MAY-2004) to the INSDC. Grimont P.A.D., Biodiversity Emerging Pathogenic Bact., Institut Pasteur, 28 rue du Dr Roux 75724 Paris Cedex 15, 75724, FRANCE. REFERENCE 2 AUTHORS Ait Tayeb L., Ageron-Ardila E., Grimont F., Grimont P.A.D. TITLE Molecular phylogeny of the genus Pseudomonas based on rpoB sequences and application for the identification of isolates JOURNAL Res. Microbiol. 156(5-6), 763-773(2005). PUBMED 15950132 FEATURES Location/Qualifiers source 1..1145 /organism="Pseudomonas fragi" /strain="type strain: LMG 2191" /mol_type="genomic DNA" /db_xref="taxon:296" CDS <1..>1145 /codon_start=1 /transl_table=11 /gene="rpoB" /product="DNA-directed RNA polymerase beta chain" /EC_number="2.7.7.6" /db_xref="GOA:Q5ZN23" /db_xref="InterPro:IPR007120" /db_xref="InterPro:IPR007645" /db_xref="InterPro:IPR014724" /db_xref="InterPro:IPR015712" /db_xref="InterPro:IPR019462" /db_xref="InterPro:IPR037033" /db_xref="InterPro:IPR042107" /db_xref="UniProtKB/TrEMBL:Q5ZN23" /protein_id="CAG30616.1" /translation="RAVKERLSMAESEGLMPQDLINAKPVAAAVKEFFGSSQLSQFMD QNNPLSEITHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINS LAAYARTNQYGFLESPYRVVKDALVTDEIVFLSAIEEADHVIAQASATMNDKKVLIDE LVAVRHLNEFTVKAPEDVTLMDVSPKQVVSVAASLIPFLEHDDANRALMGSNMQRQAV PTLRADKPLVGTGMERNVARDSGVCVVARRGGVIDSVDASRIVVRVADDEVETGEAGV DIYNLTKYTRSNQNTCINQRPLVRKGDRVQRSDIMADGPSTDMGELALGQNMRIAFMA WNGYNFEDSICLSERVVQEDRFTTIHIQELTCVARDTKLGPEEISAD" BASE COUNT 244 a 328 c 333 g 240 t ORIGIN 1 cgtgcggtca aagagcgtct gtcgatggct gaaagcgaag gcctgatgcc gcaagacctg 61 atcaacgcca agccagtggc tgcggcggtg aaagagttct tcggttcgag ccagctgtcc 121 cagttcatgg accagaacaa cccgctgtcc gagatcaccc acaagcgccg tgtttctgca 181 ctgggcccgg gcggtctgac gcgtgagcgt gccggctttg aagttcgtga cgtacacccg 241 actcactacg gccgtgtatg cccgattgag acaccggaag gtccgaacat tggtctgatc 301 aactccctgg ctgcctatgc gcgcaccaac cagtacggct tcctcgagag cccgtaccgt 361 gtggtgaaag acgcactggt gaccgacgag atcgttttcc tgtccgccat cgaagaagct 421 gatcacgtga tcgctcaggc ttcggccacg atgaacgaca agaaagtgct gatcgacgag 481 ctggtagctg ttcgtcactt gaacgaattc accgttaagg cgccggaaga cgtcaccttg 541 atggacgttt cgccgaagca ggttgtttcg gttgcagcgt cgctgatccc gttcctggaa 601 cacgatgacg ccaaccgtgc gttgatgggt tccaacatgc agcgtcaagc tgtaccgacc 661 ctgcgcgctg acaagccgct ggtaggtacc ggcatggagc gtaacgtagc tcgtgactcc 721 ggcgtttgcg tcgtggctcg tcgtggcggc gtgatcgact ctgttgatgc cagccgtatc 781 gttgttcgcg ttgctgatga tgaagttgaa actggcgaag ccggtgtcga catctacaac 841 ctgaccaaat acacccgctc caaccagaac acttgcatca accagcgtcc gctggttcgc 901 aagggtgacc gtgtacagcg cagcgacatc atggctgacg gcccgtccac cgatatgggt 961 gagctggcgt tgggtcagaa catgcgcatc gcgttcatgg cctggaacgg ttacaacttc 1021 gaagactcca tctgcctgtc ggaacgagtt gttcaagaag atcgctttac cacgatccac 1081 atccaggaac tgacctgtgt ggcacgtgac accaagcttg ggcctgaaga gatctctgca 1141 gacat //