LOCUS       AJ717444                1145 bp    DNA     linear   BCT 26-JUL-2005
DEFINITION  Pseudomonas fragi partial rpoB gene for DNA-directed RNA polymerase
            beta chain, strain LMG 2191T.
ACCESSION   AJ717444
VERSION     AJ717444.1
KEYWORDS    DNA-directed RNA polymerase beta chain; rpoB gene.
SOURCE      Pseudomonas fragi
  ORGANISM  Pseudomonas fragi
            Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
            Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 1145)
  AUTHORS   Grimont P.A.D.
  JOURNAL   Submitted (25-MAY-2004) to the INSDC. Grimont P.A.D., Biodiversity
            Emerging Pathogenic Bact., Institut Pasteur, 28 rue du Dr Roux
            75724 Paris Cedex 15, 75724, FRANCE.
REFERENCE   2
  AUTHORS   Ait Tayeb L., Ageron-Ardila E., Grimont F., Grimont P.A.D.
  TITLE     Molecular phylogeny of the genus Pseudomonas based on rpoB
            sequences and application for the identification of isolates
  JOURNAL   Res. Microbiol. 156(5-6), 763-773(2005).
   PUBMED   15950132
FEATURES             Location/Qualifiers
     source          1..1145
                     /organism="Pseudomonas fragi"
                     /strain="type strain: LMG 2191"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:296"
     CDS             <1..>1145
                     /codon_start=1
                     /transl_table=11
                     /gene="rpoB"
                     /product="DNA-directed RNA polymerase beta chain"
                     /EC_number="2.7.7.6"
                     /db_xref="GOA:Q5ZN23"
                     /db_xref="InterPro:IPR007120"
                     /db_xref="InterPro:IPR007645"
                     /db_xref="InterPro:IPR014724"
                     /db_xref="InterPro:IPR015712"
                     /db_xref="InterPro:IPR019462"
                     /db_xref="InterPro:IPR037033"
                     /db_xref="InterPro:IPR042107"
                     /db_xref="UniProtKB/TrEMBL:Q5ZN23"
                     /protein_id="CAG30616.1"
                     /translation="RAVKERLSMAESEGLMPQDLINAKPVAAAVKEFFGSSQLSQFMD
                     QNNPLSEITHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINS
                     LAAYARTNQYGFLESPYRVVKDALVTDEIVFLSAIEEADHVIAQASATMNDKKVLIDE
                     LVAVRHLNEFTVKAPEDVTLMDVSPKQVVSVAASLIPFLEHDDANRALMGSNMQRQAV
                     PTLRADKPLVGTGMERNVARDSGVCVVARRGGVIDSVDASRIVVRVADDEVETGEAGV
                     DIYNLTKYTRSNQNTCINQRPLVRKGDRVQRSDIMADGPSTDMGELALGQNMRIAFMA
                     WNGYNFEDSICLSERVVQEDRFTTIHIQELTCVARDTKLGPEEISAD"
BASE COUNT          244 a          328 c          333 g          240 t
ORIGIN      
        1 cgtgcggtca aagagcgtct gtcgatggct gaaagcgaag gcctgatgcc gcaagacctg
       61 atcaacgcca agccagtggc tgcggcggtg aaagagttct tcggttcgag ccagctgtcc
      121 cagttcatgg accagaacaa cccgctgtcc gagatcaccc acaagcgccg tgtttctgca
      181 ctgggcccgg gcggtctgac gcgtgagcgt gccggctttg aagttcgtga cgtacacccg
      241 actcactacg gccgtgtatg cccgattgag acaccggaag gtccgaacat tggtctgatc
      301 aactccctgg ctgcctatgc gcgcaccaac cagtacggct tcctcgagag cccgtaccgt
      361 gtggtgaaag acgcactggt gaccgacgag atcgttttcc tgtccgccat cgaagaagct
      421 gatcacgtga tcgctcaggc ttcggccacg atgaacgaca agaaagtgct gatcgacgag
      481 ctggtagctg ttcgtcactt gaacgaattc accgttaagg cgccggaaga cgtcaccttg
      541 atggacgttt cgccgaagca ggttgtttcg gttgcagcgt cgctgatccc gttcctggaa
      601 cacgatgacg ccaaccgtgc gttgatgggt tccaacatgc agcgtcaagc tgtaccgacc
      661 ctgcgcgctg acaagccgct ggtaggtacc ggcatggagc gtaacgtagc tcgtgactcc
      721 ggcgtttgcg tcgtggctcg tcgtggcggc gtgatcgact ctgttgatgc cagccgtatc
      781 gttgttcgcg ttgctgatga tgaagttgaa actggcgaag ccggtgtcga catctacaac
      841 ctgaccaaat acacccgctc caaccagaac acttgcatca accagcgtcc gctggttcgc
      901 aagggtgacc gtgtacagcg cagcgacatc atggctgacg gcccgtccac cgatatgggt
      961 gagctggcgt tgggtcagaa catgcgcatc gcgttcatgg cctggaacgg ttacaacttc
     1021 gaagactcca tctgcctgtc ggaacgagtt gttcaagaag atcgctttac cacgatccac
     1081 atccaggaac tgacctgtgt ggcacgtgac accaagcttg ggcctgaaga gatctctgca
     1141 gacat
//