LOCUS       AJ717442                1149 bp    DNA     linear   BCT 26-JUL-2005
DEFINITION  Pseudomonas aeruginosa partial rpoB gene for DNA-directed RNA
            polymerase beta chain, strain LMG 1242T.
ACCESSION   AJ717442
VERSION     AJ717442.1
KEYWORDS    DNA-directed RNA polymerase beta chain; rpoB gene.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
            Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 1149)
  AUTHORS   Grimont P.A.D.
  JOURNAL   Submitted (25-MAY-2004) to the INSDC. Grimont P.A.D., Biodiversity
            Emerging Pathogenic Bact., Institut Pasteur, 28 rue du Dr Roux
            75724 Paris Cedex 15, 75724, FRANCE.
REFERENCE   2
  AUTHORS   Ait Tayeb L., Ageron-Ardila E., Grimont F., Grimont P.A.D.
  TITLE     Molecular phylogeny of the genus Pseudomonas based on rpoB
            sequences and application for the identification of isolates
  JOURNAL   Res. Microbiol. 156(5-6), 763-773(2005).
   PUBMED   15950132
FEATURES             Location/Qualifiers
     source          1..1149
                     /organism="Pseudomonas aeruginosa"
                     /strain="type strain: LMG 1242"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:287"
     CDS             <1..>1149
                     /codon_start=1
                     /transl_table=11
                     /gene="rpoB"
                     /product="DNA-directed RNA polymerase beta chain"
                     /EC_number="2.7.7.6"
                     /db_xref="GOA:Q5ZN25"
                     /db_xref="InterPro:IPR007120"
                     /db_xref="InterPro:IPR007645"
                     /db_xref="InterPro:IPR014724"
                     /db_xref="InterPro:IPR015712"
                     /db_xref="InterPro:IPR019462"
                     /db_xref="InterPro:IPR037033"
                     /db_xref="InterPro:IPR042107"
                     /db_xref="UniProtKB/TrEMBL:Q5ZN25"
                     /protein_id="CAG30614.1"
                     /translation="RAVKERLSMAESEGLMPQDLINAKPVAAAIKEFFGSSQLSQFMD
                     QNNPLSEITHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINS
                     LATYARTNKYGFLESPYRVVKDSLVTDEIVFLSAIEEADHVIAQASATLNEKGQLVDE
                     LVAVRHLNEFTVKAPEDVTLMDVSPKQVVSVAASLIPFLEHDDANRALMGSNMQRQAV
                     PTLRADKPLVGTGMERNVARDSGVCVVARRGGVIDSVDASRVVVRVADDEVETGEAGV
                     DIYNLTKYTRSNQNTCINQRPLVSKGDVVARGDILADGPSTDMGELALGQNMRVAFMP
                     WNGFNFEDSICLSERVVQEDRFTTIHIQELTCVARDTKLGPEEITADIP"
BASE COUNT          224 a          379 c          353 g          193 t
ORIGIN      
        1 cgcgcggtca aggaacgcct gtccatggcc gaaagcgaag gcctgatgcc gcaggacctg
       61 atcaacgcca agccggtggc tgccgcgatc aaggagttct tcggttcgag ccagctgtcg
      121 cagttcatgg accagaacaa cccgctttcc gagatcaccc acaagcgccg cgtctccgcg
      181 ctcggcccgg gcggtctgac ccgtgagcgt gcgggcttcg aggttcgtga cgtacacccg
      241 acccactacg gccgagtgtg cccgatcgaa acccctgaag gtccgaacat cggtctgatc
      301 aactccctgg cgacctacgc ccgcaccaac aagtacggtt tcctcgagag cccgtaccgc
      361 gtggtcaagg acagcctggt aaccgacgag atcgtgttcc tgtcggcgat cgaagaagcc
      421 gaccacgtca tcgcccaggc ttcggcgacc ctcaacgaga agggtcaact ggtggacgag
      481 ctggtggccg tgcgtcacct gaacgaattc accgtgaagg cgccggaaga cgtgaccctg
      541 atggacgtgt cgccgaagca ggtcgtttcc gtcgctgcct cgctgattcc gtttctcgag
      601 cacgacgacg ccaaccgcgc actcatgggc tcgaacatgc agcgtcaggc cgtgccgacc
      661 ctgcgtgccg acaagccgct ggtgggtacc ggcatggagc gcaacgtggc gcgcgactcc
      721 ggcgtttgcg tcgtggctcg ccgtggcggt gtgatcgact cggtcgatgc cagccgtgtc
      781 gtggttcgcg tggcggatga cgaagtcgag accggcgaag cgggtgtcga catctacaac
      841 ctgaccaagt acacccgttc caaccagaac acctgcatca accagcgtcc gctggtgagc
      901 aagggtgacg tggtcgcgcg cggcgacatc ctggccgacg gtccgtccac cgacatgggc
      961 gaactggccc tgggccagaa catgcgcgta gcgttcatgc cctggaacgg cttcaacttc
     1021 gaagactcca tctgcctgtc cgagcgcgtg gtccaggaag atcgtttcac cacgatccac
     1081 atccaggaac tgacctgcgt cgctcgtgac accaagctcg gcccagagga aatcaccgcg
     1141 gacatcccg
//