LOCUS       AJ717437                1146 bp    DNA     linear   BCT 26-JUL-2005
DEFINITION  Pseudomonas caricapapayae partial rpoB gene for DNA-directed RNA
            polymerase beta chain, strain LMG 2152T.
ACCESSION   AJ717437
VERSION     AJ717437.1
KEYWORDS    DNA-directed RNA polymerase beta chain; rpoB gene.
SOURCE      Pseudomonas caricapapayae
  ORGANISM  Pseudomonas caricapapayae
            Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
            Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 1146)
  AUTHORS   Grimont P.A.D.
  JOURNAL   Submitted (25-MAY-2004) to the INSDC. Grimont P.A.D., Biodiversity
            Emerging Pathogenic Bact., Institut Pasteur, 28 rue du Dr Roux
            75724 Paris Cedex 15, 75724, FRANCE.
REFERENCE   2
  AUTHORS   Ait Tayeb L., Ageron-Ardila E., Grimont F., Grimont P.A.D.
  TITLE     Molecular phylogeny of the genus Pseudomonas based on rpoB
            sequences and application for the identification of isolates
  JOURNAL   Res. Microbiol. 156(5-6), 763-773(2005).
   PUBMED   15950132
FEATURES             Location/Qualifiers
     source          1..1146
                     /organism="Pseudomonas caricapapayae"
                     /strain="type strain: LMG 2152"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:46678"
     CDS             <1..>1146
                     /codon_start=1
                     /transl_table=11
                     /gene="rpoB"
                     /product="DNA-directed RNA polymerase beta chain"
                     /EC_number="2.7.7.6"
                     /db_xref="GOA:Q5ZN30"
                     /db_xref="InterPro:IPR007120"
                     /db_xref="InterPro:IPR007645"
                     /db_xref="InterPro:IPR014724"
                     /db_xref="InterPro:IPR015712"
                     /db_xref="InterPro:IPR019462"
                     /db_xref="InterPro:IPR037033"
                     /db_xref="InterPro:IPR042107"
                     /db_xref="UniProtKB/TrEMBL:Q5ZN30"
                     /protein_id="CAG30609.1"
                     /translation="ERAVKERLSMAESEGLMPQDLINAKPVAAAVKEFFGSSQLSQFM
                     DQNNPLSEITHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLIN
                     SLAAYARTNQYGFLESPYRVVKEGLVTEEIVFLSAIEEADHVIAQASAAMNDKQELID
                     ELVAVRHLNEFTVKAPADVTLMDVSPKQVVSVAASLIPFLEHDDANRALMGSNMQRQA
                     VPTLRADKPLVGTGMERNVARDSGVCVVARRGGVIDSVDASRIVVRVADDEVETGEAG
                     VDIYNLTKYTRSNQNTCINQRPLVSKGDRVQRSDIMADGPSTDMGELALGQNMRIAFM
                     AWNGFNFEDSICLSERVVQEARFTTIHIQELTCVARDTKLGPEEITAD"
BASE COUNT          233 a          335 c          334 g          244 t
ORIGIN      
        1 gagcgcgctg tcaaagaacg tctgtccatg gcagaaagcg aaggcctgat gcctcaggac
       61 ctgatcaacg ccaaacctgt tgcggcggcg gtcaaggagt tcttcggttc cagccagctt
      121 tcccagttca tggaccagaa caacccgctg tccgagatca cgcacaagcg tcgtgtttct
      181 gcgctcggcc ctggtggtct gacgcgtgag cgcgccggct ttgaagttcg agacgttcac
      241 ccgactcact acggccgtgt gtgcccgatc gagacgcctg aaggtccgaa catcggtctg
      301 atcaactccc tggcggccta tgcccgcacc aaccagtacg gcttcctcga gagcccgtac
      361 cgtgtggtca aggaaggtct ggtcaccgaa gagatcgtgt tcctttcggc gatcgaagaa
      421 gcggaccacg tcattgccca ggcttcggcc gcaatgaacg acaagcaaga gctgatcgac
      481 gagctggttg ctgtgcgtca cttgaacgaa ttcaccgtca aggctccagc cgatgtcacc
      541 ctgatggacg tttcgcccaa gcaggttgtc tcggtagctg catcgctgat tccgttcctc
      601 gagcacgatg acgccaaccg tgcgttgatg ggttcgaaca tgcagcgtca ggctgttcct
      661 actctgcgtg ccgacaagcc gctggtaggt actggcatgg agcgcaacgt tgctcgcgac
      721 tccggcgttt gcgtcgtggc tcgtcgtggt ggtgtgatcg actcggttga tgccagccgt
      781 atcgttgttc gtgttgccga tgatgaagtt gaaacaggtg aggcgggtgt agacatctac
      841 aacctgacca aatacacccg ttccaaccag aacacctgca tcaaccagcg tccgctggtc
      901 agcaagggtg accgtgttca gcgtagcgac atcatggctg atggcccgtc caccgacatg
      961 ggtgagctgg cgctgggtca gaacatgcgc atcgcgttca tggcctggaa cggtttcaac
     1021 ttcgaagact ccatctgtct ttctgagcgt gttgttcagg aagcccgctt caccacgatc
     1081 cacattcagg aactgacctg cgtggcgcgt gacaccaagc ttgggccaga ggaaatcaca
     1141 gctgac
//