LOCUS AJ717437 1146 bp DNA linear BCT 26-JUL-2005 DEFINITION Pseudomonas caricapapayae partial rpoB gene for DNA-directed RNA polymerase beta chain, strain LMG 2152T. ACCESSION AJ717437 VERSION AJ717437.1 KEYWORDS DNA-directed RNA polymerase beta chain; rpoB gene. SOURCE Pseudomonas caricapapayae ORGANISM Pseudomonas caricapapayae Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas. REFERENCE 1 (bases 1 to 1146) AUTHORS Grimont P.A.D. JOURNAL Submitted (25-MAY-2004) to the INSDC. Grimont P.A.D., Biodiversity Emerging Pathogenic Bact., Institut Pasteur, 28 rue du Dr Roux 75724 Paris Cedex 15, 75724, FRANCE. REFERENCE 2 AUTHORS Ait Tayeb L., Ageron-Ardila E., Grimont F., Grimont P.A.D. TITLE Molecular phylogeny of the genus Pseudomonas based on rpoB sequences and application for the identification of isolates JOURNAL Res. Microbiol. 156(5-6), 763-773(2005). PUBMED 15950132 FEATURES Location/Qualifiers source 1..1146 /organism="Pseudomonas caricapapayae" /strain="type strain: LMG 2152" /mol_type="genomic DNA" /db_xref="taxon:46678" CDS <1..>1146 /codon_start=1 /transl_table=11 /gene="rpoB" /product="DNA-directed RNA polymerase beta chain" /EC_number="2.7.7.6" /db_xref="GOA:Q5ZN30" /db_xref="InterPro:IPR007120" /db_xref="InterPro:IPR007645" /db_xref="InterPro:IPR014724" /db_xref="InterPro:IPR015712" /db_xref="InterPro:IPR019462" /db_xref="InterPro:IPR037033" /db_xref="InterPro:IPR042107" /db_xref="UniProtKB/TrEMBL:Q5ZN30" /protein_id="CAG30609.1" /translation="ERAVKERLSMAESEGLMPQDLINAKPVAAAVKEFFGSSQLSQFM DQNNPLSEITHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLIN SLAAYARTNQYGFLESPYRVVKEGLVTEEIVFLSAIEEADHVIAQASAAMNDKQELID ELVAVRHLNEFTVKAPADVTLMDVSPKQVVSVAASLIPFLEHDDANRALMGSNMQRQA VPTLRADKPLVGTGMERNVARDSGVCVVARRGGVIDSVDASRIVVRVADDEVETGEAG VDIYNLTKYTRSNQNTCINQRPLVSKGDRVQRSDIMADGPSTDMGELALGQNMRIAFM AWNGFNFEDSICLSERVVQEARFTTIHIQELTCVARDTKLGPEEITAD" BASE COUNT 233 a 335 c 334 g 244 t ORIGIN 1 gagcgcgctg tcaaagaacg tctgtccatg gcagaaagcg aaggcctgat gcctcaggac 61 ctgatcaacg ccaaacctgt tgcggcggcg gtcaaggagt tcttcggttc cagccagctt 121 tcccagttca tggaccagaa caacccgctg tccgagatca cgcacaagcg tcgtgtttct 181 gcgctcggcc ctggtggtct gacgcgtgag cgcgccggct ttgaagttcg agacgttcac 241 ccgactcact acggccgtgt gtgcccgatc gagacgcctg aaggtccgaa catcggtctg 301 atcaactccc tggcggccta tgcccgcacc aaccagtacg gcttcctcga gagcccgtac 361 cgtgtggtca aggaaggtct ggtcaccgaa gagatcgtgt tcctttcggc gatcgaagaa 421 gcggaccacg tcattgccca ggcttcggcc gcaatgaacg acaagcaaga gctgatcgac 481 gagctggttg ctgtgcgtca cttgaacgaa ttcaccgtca aggctccagc cgatgtcacc 541 ctgatggacg tttcgcccaa gcaggttgtc tcggtagctg catcgctgat tccgttcctc 601 gagcacgatg acgccaaccg tgcgttgatg ggttcgaaca tgcagcgtca ggctgttcct 661 actctgcgtg ccgacaagcc gctggtaggt actggcatgg agcgcaacgt tgctcgcgac 721 tccggcgttt gcgtcgtggc tcgtcgtggt ggtgtgatcg actcggttga tgccagccgt 781 atcgttgttc gtgttgccga tgatgaagtt gaaacaggtg aggcgggtgt agacatctac 841 aacctgacca aatacacccg ttccaaccag aacacctgca tcaaccagcg tccgctggtc 901 agcaagggtg accgtgttca gcgtagcgac atcatggctg atggcccgtc caccgacatg 961 ggtgagctgg cgctgggtca gaacatgcgc atcgcgttca tggcctggaa cggtttcaac 1021 ttcgaagact ccatctgtct ttctgagcgt gttgttcagg aagcccgctt caccacgatc 1081 cacattcagg aactgacctg cgtggcgcgt gacaccaagc ttgggccaga ggaaatcaca 1141 gctgac //