LOCUS AJ717431 1143 bp DNA linear BCT 26-JUL-2005
DEFINITION Pseudomonas rhodesiae partial rpoB gene for DNA-directed RNA
polymerase beta chain, strain CIP 104664T.
ACCESSION AJ717431
VERSION AJ717431.1
KEYWORDS DNA-directed RNA polymerase beta chain; rpoB gene.
SOURCE Pseudomonas rhodesiae
ORGANISM Pseudomonas rhodesiae
Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
Pseudomonadaceae; Pseudomonas.
REFERENCE 1 (bases 1 to 1143)
AUTHORS Grimont P.A.D.
JOURNAL Submitted (25-MAY-2004) to the INSDC. Grimont P.A.D., Biodiversity
Emerging Pathogenic Bact., Institut Pasteur, 28 rue du Dr Roux
75724 Paris Cedex 15, 75724, FRANCE.
REFERENCE 2
AUTHORS Ait Tayeb L., Ageron-Ardila E., Grimont F., Grimont P.A.D.
TITLE Molecular phylogeny of the genus Pseudomonas based on rpoB
sequences and application for the identification of isolates
JOURNAL Res. Microbiol. 156(5-6), 763-773(2005).
PUBMED 15950132
FEATURES Location/Qualifiers
source 1..1143
/organism="Pseudomonas rhodesiae"
/strain="type strain: CIP 104664"
/mol_type="genomic DNA"
/db_xref="taxon:76760"
CDS <1..>1143
/codon_start=1
/transl_table=11
/gene="rpoB"
/product="DNA-directed RNA polymerase beta chain"
/EC_number="2.7.7.6"
/db_xref="GOA:Q5ZN36"
/db_xref="InterPro:IPR007120"
/db_xref="InterPro:IPR007645"
/db_xref="InterPro:IPR014724"
/db_xref="InterPro:IPR015712"
/db_xref="InterPro:IPR019462"
/db_xref="InterPro:IPR037033"
/db_xref="InterPro:IPR042107"
/db_xref="UniProtKB/TrEMBL:Q5ZN36"
/protein_id="CAG30603.1"
/translation="RVERAVKERVSMAESEGLMPQDLINAKPGAGAVKEFFGSSQLSQ
FMDQNNPLSEITHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGL
INSLAAYARTNQYGFLESPYRVVKDALVTDEIVFLSAIEEADHVIAQASATMNDKKVL
IDELVAVRHLNEFTVKAPEDVTLMDVSPKQVVSVAASLIPFLEHDDANRALMGSNMQR
QAVPTLRADKPLVGTGMERNVARDSGVCVVARRGGVIDSVDASRIVVRVADDEVETGE
AGVDIYNLTKYTRSNQNTCINQRPLVSKGDRVQRSDIMADGPSTDMGELALGQNMRIA
FMAWNGFNFEDSICLSERVVQEDRFTPIHIQELTCVARDTKLGPEEI"
BASE COUNT 242 a 326 c 336 g 239 t
ORIGIN
1 cgtgttgagc gcgcggtcaa agagcgtgtg tcgatggctg aaagcgaagg cctgatgccg
61 caagacctga tcaacgctaa gccaggggcc ggagcggtga aagagttctt cggctccagc
121 cagctttcgc agttcatgga ccagaacaac ccgctctcag agattaccca caagcgccgt
181 gtttcggcac tgggcccggg cggtctgact cgtgaacgtg ctggcttcga agttcgtgac
241 gtacacccga cgcactacgg tcgtgtttgc ccgatcgaaa cgccggaagg tccgaacatc
301 ggtctgatca actccttggc cgcctatgcg cgcaccaacc aatatggttt cctcgagagc
361 ccgtaccgtg tggtgaaaga cgctctggtc accgacgaga tcgtgttcct gtccgcaatc
421 gaagaagccg atcacgtgat cgctcaggct tcggccacga tgaacgacaa gaaagttttg
481 atcgacgagc tggtagctgt tcgtcacttg aacgaattca ccgttaaggc gccggaagac
541 gtcaccttga tggacgtttc gccgaagcag gtagtttcgg ttgcagcgtc tctgattccg
601 ttcctggagc acgatgacgc caaccgcgcg ttgatgggtt ccaacatgca gcgtcaggct
661 gtaccaaccc tgcgcgctga caagccgctg gtaggtaccg gcatggagcg caacgtagcg
721 cgtgactccg gcgtttgcgt cgtggctcgt cgtggcggtg taatcgattc cgttgatgct
781 agccgtatcg tggttcgtgt tgccgatgac gaagttgaaa ctggcgaagc cggtgtcgac
841 atctacaacc tgaccaaata cacccgttcg aaccagaaca cctgcatcaa ccagcgtccg
901 ctggtgagca agggtgatcg cgttcagcgt agcgacatca tggctgacgg cccgtccacc
961 gacatgggtg agctggctct gggtcagaac atgcgcatcg ccttcatggc gtggaacggc
1021 ttcaacttcg aagactccat ctgcctgtcc gagcgtgttg ttcaagaaga tcgcttcacc
1081 ccgatccaca ttcaggaact gacctgtgtg gcgcgtgaca ccaagcttgg gccagaggaa
1141 atc
//