LOCUS AJ717422 1161 bp DNA linear BCT 26-JUL-2005 DEFINITION Pseudomonas savastanoi partial rpoB gene for DNA-directed RNA polymerase beta chain, strain CIP 103721T. ACCESSION AJ717422 VERSION AJ717422.1 KEYWORDS DNA-directed RNA polymerase beta chain; rpoB gene. SOURCE Pseudomonas savastanoi ORGANISM Pseudomonas savastanoi Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas. REFERENCE 1 (bases 1 to 1161) AUTHORS Grimont P.A.D. JOURNAL Submitted (25-MAY-2004) to the INSDC. Grimont P.A.D., Biodiversity Emerging Pathogenic Bact., Institut Pasteur, 28 rue du Dr Roux 75724 Paris Cedex 15, 75724, FRANCE. REFERENCE 2 AUTHORS Ait Tayeb L., Ageron-Ardila E., Grimont F., Grimont P.A.D. TITLE Molecular phylogeny of the genus Pseudomonas based on rpoB sequences and application for the identification of isolates JOURNAL Res. Microbiol. 156(5-6), 763-773(2005). PUBMED 15950132 FEATURES Location/Qualifiers source 1..1161 /organism="Pseudomonas savastanoi" /strain="type strain: CIP 103721" /mol_type="genomic DNA" /db_xref="taxon:29438" CDS <1..>1161 /codon_start=1 /transl_table=11 /gene="rpoB" /product="DNA-directed RNA polymerase beta chain" /EC_number="2.7.7.6" /db_xref="GOA:Q5ZN45" /db_xref="InterPro:IPR007120" /db_xref="InterPro:IPR007645" /db_xref="InterPro:IPR014724" /db_xref="InterPro:IPR015712" /db_xref="InterPro:IPR019462" /db_xref="InterPro:IPR037033" /db_xref="InterPro:IPR042107" /db_xref="UniProtKB/TrEMBL:Q5ZN45" /protein_id="CAG30594.1" /translation="VRVERAVKERLSMAESEGLMPQDLINAKPVAAAVKEFFGSSQLS QFMDQNNPLSEITHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIG LINSLAAYARTNQYGFLESPYRVVKEGLVTEEIVFLSAIEEADHVIAQASAAMNDKQE LIDELVAVRHLNEFTVKAPADVTLMDVSPKQVVSVAASLIPFLEHDDANRALMGSNMQ RQAVPTLRADKPLVGTGMERNVARDSGVCVVARRGGVIDSVDASRIVVRVADDEVETG EAGVDIYNLTKYTRSNQNTCINQRPLVSKGDRVQRSDIMADGPSTDMGELALGQNMRI AFMAWNGFNFEDSICLSERVVQEDRFPTIHIQELTCVARDTKLGPEEITPDIP" BASE COUNT 243 a 350 c 330 g 238 t ORIGIN 1 gtccgtgtcg agcgcgctgt caaagaacgt ctgtccatgg cagaaagcga aggcttgatg 61 cctcaggacc tgatcaacgc caaacctgtt gcggcggcgg tcaaggagtt cttcggttcc 121 agccagctgt cccagttcat ggaccagaac aacccgctgt ccgagatcac gcacaagcgt 181 cgtgtttccg cgctcggccc tggcggtctg acgcgtgagc gcgccggctt tgaagttcga 241 gacgttcacc cgactcacta cggccgtgtt tgcccgatcg agacgcctga aggtccgaac 301 atcggtctga tcaactccct ggcggcctat gcccgcacca accagtacgg cttcctcgag 361 agcccgtacc gtgtggtcaa ggaaggtctg gtcaccgaag aaatcgtctt cctttcggcg 421 atcgaagaag cggaccacgt cattgctcag gcttcggctg caatgaacga caagcaagag 481 ctgatcgacg agctggttgc tgtgcgtcac ttgaacgaat tcaccgtcaa ggcaccagcc 541 gatgtcaccc tgatggacgt ttcgcccaag caggttgtgt cggtagccgc atcgctgatc 601 ccgttcctcg agcacgatga cgccaaccgc gcattgatgg gttcgaacat gcagcgtcag 661 gctgtaccga ccctgcgtgc cgacaagccg ctggtaggta ctggcatgga gcgcaacgtt 721 gcccgcgact ccggcgtttg cgtcgtggct cgtcgtggcg gcgtgatcga ctctgtcgac 781 gccagccgta tcgttgttcg cgttgctgat gacgaagtag aaacaggtga agcaggtgta 841 gacatctaca acctgaccaa atacacccgt tcgaaccaga acacctgcat caaccagcgt 901 cctctggtga gcaagggtga ccgtgttcag cgtagcgaca tcatggctga cggtccgtct 961 accgatatgg gtgagctggc tctgggtcag aacatgcgca tcgcgttcat ggcctggaac 1021 ggtttcaact tcgaagactc catctgcctc tccgagcgtg tagttcaaga agaccgcttc 1081 ccaacgatcc acattcagga actgacctgt gtggctcgtg acaccaagct tgggcctgaa 1141 gagatcaccc ccgacatccc a //