LOCUS AJ717419 1171 bp DNA linear BCT 26-JUL-2005
DEFINITION Pseudomonas fulva partial rpoB gene for DNA-directed RNA polymerase
beta chain, strain CIP 106765T.
ACCESSION AJ717419
VERSION AJ717419.1
KEYWORDS DNA-directed RNA polymerase beta chain; rpoB gene.
SOURCE Pseudomonas fulva
ORGANISM Pseudomonas fulva
Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
Pseudomonadaceae; Pseudomonas.
REFERENCE 1 (bases 1 to 1171)
AUTHORS Grimont P.A.D.
JOURNAL Submitted (25-MAY-2004) to the INSDC. Grimont P.A.D., Biodiversity
Emerging Pathogenic Bact., Institut Pasteur, 28 rue du Dr Roux
75724 Paris Cedex 15, 75724, FRANCE.
REFERENCE 2
AUTHORS Ait Tayeb L., Ageron-Ardila E., Grimont F., Grimont P.A.D.
TITLE Molecular phylogeny of the genus Pseudomonas based on rpoB
sequences and application for the identification of isolates
JOURNAL Res. Microbiol. 156(5-6), 763-773(2005).
PUBMED 15950132
FEATURES Location/Qualifiers
source 1..1171
/organism="Pseudomonas fulva"
/strain="type strain: CIP 106765"
/mol_type="genomic DNA"
/db_xref="taxon:47880"
CDS <1..>1171
/codon_start=1
/transl_table=11
/gene="rpoB"
/product="DNA-directed RNA polymerase beta chain"
/EC_number="2.7.7.6"
/db_xref="GOA:Q5ZN48"
/db_xref="InterPro:IPR007120"
/db_xref="InterPro:IPR007645"
/db_xref="InterPro:IPR015712"
/db_xref="InterPro:IPR019462"
/db_xref="InterPro:IPR042107"
/db_xref="UniProtKB/TrEMBL:Q5ZN48"
/protein_id="CAG30591.1"
/translation="LLRVERAVKERLSMAESEGLMPQDLINAKPVAAAVKEFFGSSQL
SQFMDQNNPLSEITHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNI
GLINSLAAYARTNQYGFLESPYRVVKEGVVSDDIVFLSAIEEADHVIAQASAAMNDKK
QLIDELVAVRHLNEFTVKAPEDVTLMDVSPKQVVSVAASLIPFLEHDDANRALMGSNM
QRQAVPTLRADKPLVGTGMERNVARDSGVCVVARRGGVIDSVDASRIVVRVADDEVET
GEAGVDIYNLTKYTRSNQNTCINQRPLVSKGDKVQRGDIMADGPSTDMGERRWVRTCA
SRSWRGTASTSKTPSAFPSVWFRKIASPRSTSRNRPVWPVTPSLAQKRSLQTSRTW"
BASE COUNT 242 a 358 c 353 g 218 t
ORIGIN
1 ctgttgcgtg tagagcgtgc ggtcaaggaa cgtctgtcga tggctgaaag cgaaggcctg
61 atgcctcagg acctgatcaa cgccaagccg gttgcggcgg cggtgaaaga gttcttcggt
121 tccagccagc tttcgcagtt catggaccag aacaacccgc tctccgagat cacccacaag
181 cgccgtgttt ccgcactcgg ccctggcggt ctgacccgtg agcgtgctgg cttcgaagtt
241 cgtgacgtac acccgaccca ctacggccgc gtgtgcccga tcgaaacccc tgaaggtccg
301 aacatcggtc tgatcaactc cctggctgcg tatgctcgca ccaaccagta cggcttcctg
361 gaaagcccgt accgtgtggt gaaggaaggc gtggtcagcg acgacatcgt attcctgtcc
421 gccatcgaag aggccgatca cgtgatcgcc caggcttcgg ccgcgatgaa cgacaagaag
481 cagctgatcg atgagctggt cgctgtgcgt cacctgaacg aattcaccgt caaggcgccg
541 gaagacgtca ccctgatgga cgtttcgccc aagcaggtag tctcggtcgc cgcgtcgctg
601 attccattcc tcgagcacga cgacgccaac cgtgcgttga tgggctcgaa catgcagcgt
661 caggctgtac cgaccctgcg tgccgacaag ccgctggtag gtaccggcat ggagcgcaac
721 gttgcccgtg actccggtgt ctgcgtagtt gcccgccgcg gtggcgtgat cgactcggtc
781 gacgccagcc gtatcgtggt ccgtgtagcg gatgacgaag tggaaaccgg cgaggcaggt
841 gtagatatct acaacctgac caagtacacc cgttcgaacc agaacacctg catcaaccag
901 cgtccgctgg tgagcaaagg tgacaaggtg cagcgcggcg atatcatggc cgatggcccg
961 tccaccgaca tgggtgagcg gcgctgggtc agaacatgcg catcgcgttc atggcgtgga
1021 acggcttcaa cttcgaagac tccatctgcc tttccgagcg tgtggttcag gaagatcgct
1081 tcaccacgat ccacatccag gaaccgacct gtgtggcccg tgacaccaag cttggcccag
1141 aagagatcac tgcagacatc ccgaacgtgg g
//