LOCUS       AJ414246                 776 bp    DNA     linear   BCT 24-FEB-2006
DEFINITION  Pseudomonas mendocina partial atpD gene for atpD beta synthase
            chain.
ACCESSION   AJ414246
VERSION     AJ414246.1
KEYWORDS    atpD beta synthase chain; atpD gene.
SOURCE      Pseudomonas mendocina
  ORGANISM  Pseudomonas mendocina
            Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
            Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 776)
  AUTHORS   Young J.M.
  JOURNAL   Submitted (05-SEP-2001) to the INSDC. Young J.M., Fungal and
            Bacterial Systematics, Landcare Research, PB 92170, Auckland, 1003,
            NEW ZEALAND.
REFERENCE   3
  AUTHORS   Hilario E.M., Buckley T.R., Young J.M.
  TITLE     Improved resolution on the phylogenetic relationships among
            Pseudomonas by the combined analysis of atp D, car A, rec A and 16S
            rDNA
  JOURNAL   Antonie Van Leeuwenhoek 86(1), 51-64(2004).
   PUBMED   15103237
FEATURES             Location/Qualifiers
     source          1..776
                     /organism="Pseudomonas mendocina"
                     /isolate="ICMP 13540 (= ATCC 25411)"
                     /mol_type="genomic DNA"
                     /note="type strain"
                     /db_xref="taxon:300"
     CDS             <1..>776
                     /codon_start=1
                     /transl_table=11
                     /gene="atpD"
                     /product="atpD beta synthase chain"
                     /db_xref="GOA:Q8VMQ4"
                     /db_xref="InterPro:IPR000194"
                     /db_xref="InterPro:IPR003593"
                     /db_xref="InterPro:IPR005722"
                     /db_xref="InterPro:IPR020003"
                     /db_xref="InterPro:IPR027417"
                     /db_xref="UniProtKB/TrEMBL:Q8VMQ4"
                     /protein_id="CAC88852.1"
                     /translation="EEQWEIHRAAPSYAEQAGGNDLLETGIKVIDLVCPFAKGGKVGL
                     FGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALV
                     YGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPS
                     AVGYQPTLAEEMGVLQERITSTKKGSITSIQAVYVPADDLTDPSPATTFAHLDATVVL
                     SRDIASLGIYPAVDPLDSTSRQLDPNVIGTEHYETARGVQ"
BASE COUNT          160 a          242 c          226 g          148 t
ORIGIN      
        1 gaagagcagt gggaaatcca ccgcgctgca ccgagctatg ccgagcaagc cggcggtaac
       61 gacctgctgg aaaccggtat caaggtaatc gacctggtct gcccgttcgc caagggcggt
      121 aaggtcggtc tgttcggtgg cgccggtgtc ggcaagaccg tgaacatgat ggaactgatc
      181 cgtaacatcg ccatcgagca cagcggttat tccgtgttcg ccggtgtggg tgagcgtact
      241 cgtgagggta acgacttcta ccacgagatg aaggattcca acgttctcga caaggtagcc
      301 ctggtctacg gccagatgaa cgagccgcca ggcaaccgtc tgcgcgtagc actgaccggc
      361 ctgaccatgg ccgagaagtt ccgtgacgaa ggtcgtgacg ttctgctgtt cgtcgacaac
      421 atctaccgtt acaccctggc cggtaccgaa gtatccgcac tgctcggccg tatgccgtcg
      481 gcagtaggtt accagcctac cctggccgag gagatgggcg ttctgcagga gcgtattacc
      541 tccaccaaga aaggctccat tacttcgatc caggccgtat acgtacctgc ggacgacctg
      601 accgacccga gcccggcgac caccttcgcc cacttggacg ccaccgtcgt actgagccgt
      661 gacatcgctt ccctgggtat ctacccggcc gttgacccgc tggactccac cagccgtcag
      721 ctggatccga acgtcattgg caccgaacac tacgagaccg ctcgtggcgt tcagta
//