LOCUS       AJ414233                 776 bp    DNA     linear   BCT 24-FEB-2006
DEFINITION  Pseudomonas agarici partial atpD gene for atpD beta synthase chain.
ACCESSION   AJ414233
VERSION     AJ414233.1
KEYWORDS    atpD beta synthase chain; atpD gene.
SOURCE      Pseudomonas agarici
  ORGANISM  Pseudomonas agarici
            Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
            Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 776)
  AUTHORS   Young J.M.
  JOURNAL   Submitted (05-SEP-2001) to the INSDC. Young J.M., Fungal and
            Bacterial Systematics, Landcare Research, PB 92170, Auckland, 1003,
            NEW ZEALAND.
REFERENCE   3
  AUTHORS   Hilario E.M., Buckley T.R., Young J.M.
  TITLE     Improved resolution on the phylogenetic relationships among
            Pseudomonas by the combined analysis of atp D, car A, rec A and 16S
            rDNA
  JOURNAL   Antonie Van Leeuwenhoek 86(1), 51-64(2004).
   PUBMED   15103237
FEATURES             Location/Qualifiers
     source          1..776
                     /organism="Pseudomonas agarici"
                     /isolate="ICMP 2656(= ATCC 25941)"
                     /mol_type="genomic DNA"
                     /note="type strain"
                     /db_xref="taxon:46677"
     CDS             <1..>776
                     /codon_start=1
                     /transl_table=11
                     /gene="atpD"
                     /product="atpD beta synthase chain"
                     /db_xref="GOA:Q8VMT2"
                     /db_xref="InterPro:IPR000194"
                     /db_xref="InterPro:IPR003593"
                     /db_xref="InterPro:IPR005722"
                     /db_xref="InterPro:IPR020003"
                     /db_xref="InterPro:IPR027417"
                     /db_xref="UniProtKB/TrEMBL:Q8VMT2"
                     /protein_id="CAC88839.1"
                     /translation="DERWGIHRAAPSFAEQAGGNDLLETGIKVIDLVCPFAKGGKVGL
                     FGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALV
                     YGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPS
                     AVGYQPTLAEEMGVLQERITSTKEGSITSIQAVYVPADDLTDPSPATTFAHLDATVVL
                     SRDIASLGIYPAVDPLDSTSRQLDPNVIGQDHYDTARGVQ"
BASE COUNT          151 a          238 c          238 g          149 t
ORIGIN      
        1 gacgagcgtt ggggtatcca ccgtgcggcg ccgtcgttcg ccgagcaggc gggcggcaac
       61 gacctgctgg aaaccggcat caaggttatc gatctggtct gcccgttcgc caagggcggt
      121 aaagtcggtc tgttcggtgg tgccggtgtc ggcaagaccg ttaacatgat ggaactgatc
      181 cgtaacatcg ccatcgagca cagcggttat tcggtgttcg ccggtgtggg tgagcgtact
      241 cgtgagggta acgacttcta ccacgagatg aaggactcca acgttctgga caaagtggca
      301 ctggtctacg gccagatgaa cgagccgccg ggaaaccgtc tgcgcgtcgc cctgaccggc
      361 ctgaccatgg ccgagaagtt ccgtgacgaa ggtaacgacg ttctgctgtt cgtcgacaac
      421 atctaccgtt acaccctggc cggtaccgaa gtatccgcac tgctgggccg tatgccgtcg
      481 gcggtaggtt accagccgac cctggctgaa gagatgggcg tgctgcaaga gcgcatcact
      541 tcgaccaagg aaggttcgat cacctcgatc caggcggtat acgtaccggc ggatgacttg
      601 accgacccgt cgccagcgac caccttcgcc cacttggacg ccaccgtcgt attgtcccgt
      661 gacatcgcct ccctgggtat ctacccggcg gtcgatccac tggactcgac ttcgcgccag
      721 ctggacccga acgtgatcgg ccaggaccac tacgacactg ctcgcggcgt ccagta
//