LOCUS AJ414233 776 bp DNA linear BCT 24-FEB-2006 DEFINITION Pseudomonas agarici partial atpD gene for atpD beta synthase chain. ACCESSION AJ414233 VERSION AJ414233.1 KEYWORDS atpD beta synthase chain; atpD gene. SOURCE Pseudomonas agarici ORGANISM Pseudomonas agarici Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas. REFERENCE 1 (bases 1 to 776) AUTHORS Young J.M. JOURNAL Submitted (05-SEP-2001) to the INSDC. Young J.M., Fungal and Bacterial Systematics, Landcare Research, PB 92170, Auckland, 1003, NEW ZEALAND. REFERENCE 3 AUTHORS Hilario E.M., Buckley T.R., Young J.M. TITLE Improved resolution on the phylogenetic relationships among Pseudomonas by the combined analysis of atp D, car A, rec A and 16S rDNA JOURNAL Antonie Van Leeuwenhoek 86(1), 51-64(2004). PUBMED 15103237 FEATURES Location/Qualifiers source 1..776 /organism="Pseudomonas agarici" /isolate="ICMP 2656(= ATCC 25941)" /mol_type="genomic DNA" /note="type strain" /db_xref="taxon:46677" CDS <1..>776 /codon_start=1 /transl_table=11 /gene="atpD" /product="atpD beta synthase chain" /db_xref="GOA:Q8VMT2" /db_xref="InterPro:IPR000194" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR005722" /db_xref="InterPro:IPR020003" /db_xref="InterPro:IPR027417" /db_xref="UniProtKB/TrEMBL:Q8VMT2" /protein_id="CAC88839.1" /translation="DERWGIHRAAPSFAEQAGGNDLLETGIKVIDLVCPFAKGGKVGL FGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALV YGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPS AVGYQPTLAEEMGVLQERITSTKEGSITSIQAVYVPADDLTDPSPATTFAHLDATVVL SRDIASLGIYPAVDPLDSTSRQLDPNVIGQDHYDTARGVQ" BASE COUNT 151 a 238 c 238 g 149 t ORIGIN 1 gacgagcgtt ggggtatcca ccgtgcggcg ccgtcgttcg ccgagcaggc gggcggcaac 61 gacctgctgg aaaccggcat caaggttatc gatctggtct gcccgttcgc caagggcggt 121 aaagtcggtc tgttcggtgg tgccggtgtc ggcaagaccg ttaacatgat ggaactgatc 181 cgtaacatcg ccatcgagca cagcggttat tcggtgttcg ccggtgtggg tgagcgtact 241 cgtgagggta acgacttcta ccacgagatg aaggactcca acgttctgga caaagtggca 301 ctggtctacg gccagatgaa cgagccgccg ggaaaccgtc tgcgcgtcgc cctgaccggc 361 ctgaccatgg ccgagaagtt ccgtgacgaa ggtaacgacg ttctgctgtt cgtcgacaac 421 atctaccgtt acaccctggc cggtaccgaa gtatccgcac tgctgggccg tatgccgtcg 481 gcggtaggtt accagccgac cctggctgaa gagatgggcg tgctgcaaga gcgcatcact 541 tcgaccaagg aaggttcgat cacctcgatc caggcggtat acgtaccggc ggatgacttg 601 accgacccgt cgccagcgac caccttcgcc cacttggacg ccaccgtcgt attgtcccgt 661 gacatcgcct ccctgggtat ctacccggcg gtcgatccac tggactcgac ttcgcgccag 721 ctggacccga acgtgatcgg ccaggaccac tacgacactg ctcgcggcgt ccagta //