LOCUS AF513384 2043 bp mRNA linear PLN 02-JUN-2003
DEFINITION Oryza sativa (japonica cultivar-group) histone deacetylase HDAC3
mRNA, complete cds; alternatively spliced.
ACCESSION AF513384
VERSION AF513384.1
KEYWORDS .
SOURCE Oryza sativa Japonica Group (Japanese rice)
ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE 1 (bases 1 to 2043)
AUTHORS Jang,I.-C., Pahk,Y.-M., Song,S.I., Nahm,B.H. and Kim,J.-K.
TITLE Characterization of rice histone deacetylase, OsHDAC3
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 2043)
AUTHORS Jang,I.-C., Pahk,Y.-M., Song,S.I., Nahm,B.H. and Kim,J.-K.
TITLE Direct Submission
JOURNAL Submitted (20-MAY-2002) Department of Biological Science, Myongji
University, Namdong San 38-2, Yongin, Kyonggi-Do 449-728, Korea
FEATURES Location/Qualifiers
source 1..2043
/organism="Oryza sativa Japonica Group"
/mol_type="mRNA"
/db_xref="taxon:39947"
/tissue_type="callus"
CDS 97..1629
/note="alternatively spliced"
/codon_start=1
/product="histone deacetylase HDAC3"
/protein_id="AAP47173.1"
/translation="MDPSSAGAGGNSLASASCGDAQKRRVCYFYDPEVGNYYYGQGHP
MKPHRVRMTHALLAHYGLLAPAKMEVLRPLPARGIDLCRFHSDDYVAFLRAVTPETQL
GQVRALRRFNIGPDCPVFDGLYAYCQTYAGASVGAAVKLNHGTHDIAINWSGGLHHAK
KSEASGFCYVNDIVLAILELLKLHERVLYIDIDIHHGDGVEEAFYTTNRVMTVSFHKF
GDYFPGTGDIRDIGYSEGKYYCLNVPLDDGIDDDSYQSIFKPIISKVMEMYRPGAVVL
QCGADSLSGDRLGCFNLSGKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARCWCYETG
VALGEELQEKLPYNEYYEYFGPEYSLYVAASNMENRNTNKQLEEIKCNILDNLSKLQH
APSVQFQERIPETKLPEPDEDQEDPDERHDPDSDMVLDDHKPTGHSARSLIHNIGVKR
EITETETKDQHGKRLTTEHKGPEPMAEDLGSSKQAPTADANAVAVNAPGNARNEPGSS
PK"
BASE COUNT 572 a 529 c 513 g 429 t
ORIGIN
1 cagcaagcac ccgaccacaa cacacacgcg agcttctcga gagaggaaaa aaacccaacc
61 ccgaattcgg cggcggcggc ggaggcggag gcggcgatgg acccctcgtc ggcgggcgcg
121 ggcggcaact cgctggcgtc ggcgtcgtgc ggcgacgcgc agaagcggcg ggtgtgctac
181 ttctacgacc cggaggtggg caactactac tacggtcagg gccacccgat gaagccccac
241 cgggtgagga tgacccacgc gctgctcgcc cactacggcc tcctcgcccc ggccaagatg
301 gaggtgctcc gcccgctccc cgcccgcggc atcgacctct gccgcttcca ctccgacgac
361 tacgtcgcct tcctccgcgc cgtcaccccg gagacccagc tcggccaggt ccgcgccctc
421 cgccgcttca acatcggccc ggactgcccc gtcttcgacg gcctctacgc ctactgccag
481 acctacgcgg gggcctccgt cggcgccgcc gtcaagctca accacggcac ccacgacatc
541 gccatcaact ggtccggcgg gttgcaccac gccaagaagt ccgaggcctc cggcttctgc
601 tacgtcaacg acatcgtcct cgccatcctc gagctcctca agctccatga gcgagttctg
661 tatattgata ttgatatcca tcatggagat ggagttgagg aggcattcta cacaacaaac
721 agggttatga cagtctcatt tcacaagttt ggggattatt tcccgggaac aggggatatc
781 cgcgacattg ggtattcaga agggaagtat tactgcctga atgtcccgct ggatgatgga
841 attgatgatg acagctacca gtccatcttc aagccgatca tcagcaaagt catggagatg
901 tatcgtcctg gtgcagtcgt gcttcagtgc ggcgctgatt cgttgtccgg tgataggttg
961 ggctgtttca atctctcagg gaaaggtcat gctgaatgtg ttaagttcat gaggtctttc
1021 aatgttccgt tgcttcttct tggtggtggt ggatatacca taagaaatgt tgcacgctgc
1081 tggtgttacg agacaggagt tgcacttggt gaagagctac aggagaagtt gccttacaat
1141 gagtattatg aatattttgg tccagaatac agtctttacg ttgcagcaag taacatggag
1201 aacagaaata caaacaagca actggaggaa ataaaatgca atattctgga caatctttca
1261 aaacttcaac atgcacctag cgtccaattt caagagcgaa ttcctgaaac aaagctacct
1321 gagccagatg aagatcaaga ggatccagat gaaaggcacg accctgactc tgatatggtg
1381 ttggatgatc acaaacctac gggacactca gcaagaagcc ttattcacaa catcggagta
1441 aagagagaaa ttactgaaac agagaccaaa gatcagcatg gtaagagatt aacaaccgaa
1501 cataaaggac cagaaccgat ggcagaggat cttggttcct ccaagcaagc tcctactgcg
1561 gatgcaaatg cggtggccgt caacgcgcca ggcaacgcca ggaatgaacc gggaagctca
1621 cccaaatgac cgaacccacc agcagctatg caccagaaga ccatgattta gctaccttca
1681 ggacacgagc tctctgtcaa ggtttcctgc atgctcttaa gttggcagaa actggagttg
1741 atctgtatac tgcatcttga catttcaaac ttaaaaatcg acacaaatca agagcaaaca
1801 ctgtttgatt gtttcttctg taggagttta ccattgtttc ttttgttgaa gaagtccata
1861 atgttcaggc aatactggac gtggaggcat tagtctgact gaccaatgta gtacaaaaca
1921 aaacatgtaa cgtgaagcaa gttaaaatgt acagtctgtt agactgttag atggagatat
1981 ggaatttcag gcgaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2041 aaa
//