LOCUS AF289030 5374 bp mRNA linear HUM 26-JUL-2016 DEFINITION Homo sapiens Down syndrome cell adhesion molecule splice variant (DSCAM) mRNA, partial cds. ACCESSION AF289030 VERSION AF289030.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 5374) AUTHORS Agarwala,K.L., Suzuki,T. and Yamakawa,K. TITLE Direct Submission JOURNAL Submitted (23-JUL-2000) Neurogenetics, RIKEN Brain Science, 2-1, Hirosawa, Wako-shi, Saitama 351-0198, Japan FEATURES Location/Qualifiers source 1..5374 /db_xref="H-InvDB:HIT000076375" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="21" /map="21q22.2-22.3" gene <1..5374 /gene="DSCAM" CDS <1..5241 /gene="DSCAM" /note="DSCI1" /codon_start=1 /product="Down syndrome cell adhesion molecule splice variant" /protein_id="AAL56711.1" /translation="LGHPEPDYRWLKDNMPLELSGRFQKTVTGLLIENIRPSDSGSYV CEVSNRYGTAKVIGRLYVKQPLKATISPRKVKSSVGSQVSLSCSVTGTEDQELSWYRN GEILNPGKNVRITGINHENLIMDHMVKSDGGAYQCFVRKDKLSAQDYVQVVLEDGTPK IISAFSEKVVSPAEPVSLMCNVKGTPLPTITWTLDDDPILKGGSHRISQMITSEGNVV SYLNISSSQVRDGGVYRCTANNSAGVVLYQARINVRGPASIRPMKNITAIAGRDTYIH CRVIGYPYYSIKWYKNSNLLPFNHRQVAFENNGTLKLSDVQKEVDEGEYTCNVLVQPQ LSTSQSVHVTVKVPPFIQPFEFPRFSIGQRVFIPCVVVSGDLPITITWQKDGRPIPGS LGVTIDNIDFTSSLRISNLSLMHNGNYTCIARNEAAAVEHQSQLIVRVPPKFVVQPRD QDGIYGKAVILNCSAEGYPVPTIVWKFSKGAGVPQFQPIALNGRIQVLSNGSLLIKHV VEEDSGYYLCKVSNDVGADVSKSMYLTVKIPAMITSYPNTTLATQGQKKEMSCTAHGE KPIIVRWEKEDRIINPEMARYLVSTKEVGEEVISTLQILPTVREDSGFFSCHAINSYG EDRGIIQLTVQEPPDPPEIEIKDVKARTITLRWTMGFDGNSPITGYDIECKNKSDSWD SAQRTKDVSPQLNSATIIDIHPSSTYSIRMYAKNRIGKSEPSNELTITADEAAPDGPP QEVHLEPISSQSIRVTWKAPKKHLQNGIIRGYQIGYREYSTGGNFQFNIISVDTSGDS EVYTLDNLNKFTQYGLVVQACNRAGTGPSSQEIITTTLEDVPSYPPENVQAIATSPES ISISWSTLSKEALNGILQGFRVIYWANLMDGELGEIKNITTTQPSLELDGLEKYTNYS IQVLAFTRAGDGVRSEQIFTRTKEDVPGPPAGVKAAAASASMVFVSWLPPLKLNGIIR KYTVFCSHPYPTVISEFEASPDSFSYRIPNLSRNRQYSVWVVAVTSAGRGNSSEIITV EPLAKAPARILTFSGTVTTPWMKDIVLPCKAVGDPSPAVKWMKDSNGTPSLVTIDGRR SIFSNGSFIIRTVKAEDSGYYSCIANNNWGSDEIILNLQVQVPPDQPRLTVSKTTSSS ITLSWLPGDNGGSSIRGYILQYSEDNSEQWGSFPISPSERSYRLENLKCGTWYKFTLT AQNGVGPGRISEIIEAKTLGKEPQFSKEQELFASINTTRVRLNLIGWNDGGCPITSFT LEYRPFGTTVWTTAQRTSLSKSYILYDLQEATWYELQMRVCNSAGCAEKQANFATLNY DGSTIPPLIKSVVQNEEGLTTNEGLKMLVTISCILVGVLLLFVLLLVVRRRRREQRLK RLRDAKSLAEMLMSKNTRTSDTLSKQQQTLRMHIDIPRAQLLIEERDTMETIDDRSTV LLTDADFGEAAKQKSLTVTHTVHYQSVSQATGPLVDVSDARPGTNPTTRRNAKAGPTA RNRYASQWTLNRPHPTISAHTLTTDWRLPTPRAAGSVDKESDSYSVSPSQDTDRARSS MVSTESASSTYEELARAYEHAKMEEQLRHAKFTITECFISDTSSEQLTAGTNEYTDSL TSSTPSESGICRFTASPPKPQDGGRVMNMAVPKAHRPGGPGTSRDLSLGQACLEPQKS RTLKRPTVLEPIPMEAASSASSTREGQSWQPGAVATLPQREGAELGQAAKMSSSQESL LDSRGHLKGNNPYAKSYTLV" BASE COUNT 1452 a 1450 c 1373 g 1099 t ORIGIN 1 ctcgggcacc ctgagccaga ttaccgctgg ctgaaggaca acatgcccct ggaactttca 61 gggaggttcc agaagaccgt gacggggctg ctcattgaga acattcgccc ctcggactca 121 ggcagctatg tttgtgaagt gtccaacaga tacggaactg ctaaggtgat aggccgcctg 181 tacgtgaaac agccactgaa agccaccatc agtcccagga aggttaaaag cagcgtgggt 241 agccaagttt ccttgtcctg cagcgtgaca ggaactgagg accaggaact ctcctggtac 301 cgcaatggtg aaatcctcaa ccctggaaaa aatgtgagga tcacagggat caaccacgaa 361 aaccttataa tggatcacat ggtcaaaagt gacgggggcg cataccagtg ctttgtgcgc 421 aaggacaagc tgtccgctca agactatgtg caggtggtcc ttgaagatgg aactcccaaa 481 attatttctg cctttagtga aaaggtggtg agtccagcag agccggtttc ccttatgtgc 541 aacgtgaagg gaacaccttt gcccacgatc acgtggaccc tggacgatga cccgattctc 601 aagggtggca gtcaccgcat cagccagatg atcacgtcgg aggggaacgt ggtcagctac 661 ctgaacatct ccagctccca ggtccgggac gggggagtct accgctgcac tgccaacaac 721 tcggcgggag tcgtcctgta ccaggctcga ataaacgtaa gagggcctgc aagcattcga 781 ccaatgaaaa acatcacagc aatagcagga cgggacacat acattcactg tcgtgtgatt 841 ggctatccgt attactccat taaatggtac aagaactcta acctgcttcc tttcaaccac 901 cgccaagtgg catttgagaa caatggaact cttaaacttt cagatgtgca aaaggaagtg 961 gacgaggggg agtacacgtg caacgtgttg gttcaaccac aactctccac cagccagagc 1021 gtccacgtga ccgtgaaagt tccgcctttc atacaaccct ttgagtttcc aagattctcc 1081 attgggcagc gggtcttcat cccctgtgtt gtggtctcag gggacttacc catcacgatc 1141 acctggcaga aggatggccg gccaatccct gggagccttg gggtgaccat tgacaatatt 1201 gacttcacga gctccttgag gatttccaat ctctcgctca tgcacaatgg gaattacacc 1261 tgcatagccc ggaatgaggc cgccgctgtg gagcaccaaa gccagttgat tgtcagagtt 1321 cctcccaagt ttgtggttca gccacgggac caggacggga tttatggcaa agcagtcatc 1381 ctcaattgtt ctgctgaggg ttaccctgta cctaccatcg tgtggaaatt ctctaaaggt 1441 gctggggttc cccagttcca gccaattgcc ctaaatggcc gaatccaagt tctcagcaat 1501 gggtcgttgc tgatcaagca tgtcgtggag gaagacagtg gctactacct ctgcaaggtc 1561 agcaacgatg tgggcgcaga cgtcagcaag tccatgtacc tcacggttaa aattcctgcg 1621 atgataacat cctatccaaa tactaccctg gccacgcagg ggcagaaaaa ggagatgagc 1681 tgcacggcgc atggtgagaa gcccattata gtccgctggg agaaggagga ccgaatcatt 1741 aaccctgaga tggcccgtta tcttgtgtcc accaaggagg tgggagaaga ggtgatttct 1801 actctgcaga ttttgccaac tgtgagagaa gattctggtt tcttttcctg ccatgctatt 1861 aattcttatg gggaggaccg tggaataatt cagctcacag tgcaagagcc cccagaccct 1921 cccgaaattg agatcaaaga tgtcaaagca cgcacaatta cgctcaggtg gaccatgggg 1981 tttgatggaa acagtcccat cacaggctac gatattgaat gcaaaaataa atcagactcc 2041 tgggattctg ctcagagaac caaagatgtt tcccctcagc tgaactcggc caccatcatt 2101 gatatccacc cttcctccac ctacagcatc cgcatgtacg ccaagaaccg gattggcaag 2161 agcgagccca gcaacgagct caccatcacg gcggacgagg cagctcctga tggtccacct 2221 caggaagttc acctggagcc tatatcatct cagagcatca gggtcacatg gaaggctccc 2281 aagaaacatt tgcaaaatgg gattatccgt ggctaccaaa taggttaccg agagtacagc 2341 actgggggta acttccaatt caacattatc agtgtcgaca ccagcgggga cagtgaggtt 2401 tacaccctgg acaacctgaa taagttcact cagtacggcc tggtggtgca ggcctgtaac 2461 cgggccggca cggggccttc ttctcaggaa atcatcacca ccactctcga ggatgtgccc 2521 agttaccccc ccgaaaatgt ccaagccata gcaacatcac cagaaagcat atcaatatcc 2581 tggtccacac tttccaagga agccttgaat ggaattctcc aggggttcag agtcatttac 2641 tgggccaacc tcatggacgg agagctgggt gagattaaaa acatcaccac cacacagcct 2701 tcactggagc tggacgggct ggaaaagtac accaactaca gcatccaggt gctggccttc 2761 acccgcgcag gagacggggt caggagtgag cagatcttca cccggaccaa agaggatgtt 2821 ccaggtcctc ccgcgggtgt gaaggcagcg gcggcctcag cctccatggt ctttgtgtcc 2881 tggcttcccc ctctcaagct gaacggcatc atccgaaagt acactgtatt ctgctcccac 2941 ccctatccca cagtgatcag cgagtttgag gcctctcccg actcgttttc ctacagaatt 3001 cccaacctga gtaggaatcg tcagtacagc gtctgggtgg tggctgttac ttcagccgga 3061 agaggcaaca gcagtgaaat catcacagtc gagccactag caaaagctcc tgcacgaatc 3121 ctgaccttca gtgggacagt gactactcca tggatgaaag acattgtctt gccttgtaag 3181 gctgttgggg acccttctcc tgcagtcaaa tggatgaaag acagtaacgg gacacccagt 3241 ctagtaacga ttgatgggcg gaggagcatc tttagcaacg gaagcttcat tattcgcacg 3301 gtgaaagcag aagactccgg ctattacagc tgcattgcca ataacaactg gggatctgat 3361 gaaattattt taaacttaca agtacaagtt ccaccagatc agcctcggct tacagtctcc 3421 aagaccacgt cttcctccat caccctttct tggctccctg gagacaacgg gggcagctct 3481 atcagaggat acatactgca gtactccgag gacaatagtg agcagtgggg gagttttcca 3541 atcagcccca gcgaacgttc ctatcgcttg gaaaatctca aatgtgggac ttggtataag 3601 ttcacactga cagcccaaaa tggagtgggc ccagggcgca taagtgaaat catagaagca 3661 aagaccttag gaaaagagcc ccagttctca aaggagcagg agctgtttgc cagcatcaac 3721 accacacgcg tgaggctgaa cctcattggc tggaatgatg gcggctgccc catcacctcc 3781 ttcacactag agtacaggcc ctttgggacc acagtttgga ccacagctca gaggacctct 3841 ctctccaagt cctacatcct gtatgacctg caggaagcca cctggtatga gctgcagatg 3901 cgggtgtgca acagtgcggg ctgcgcggag aagcaggcca acttcgctac gctgaactac 3961 gatggcagta caattcctcc actcattaag tcagttgtcc aaaacgaaga agggctgacg 4021 accaacgagg ggctcaagat gctggtgacc atctcctgta tcctggtggg ggtcttgctg 4081 ctgtttgtgc tcctgctggt tgtgcggagg aggcggcggg agcagaggct aaagaggctg 4141 cgagatgcaa agagtttagc tgaaatgctc atgagtaaga atacccggac ttcagatacg 4201 ttaagcaagc aacagcagac cctgcgaatg cacatcgaca tacccagggc tcagcttttg 4261 attgaagaga gagacacgat ggagaccatt gatgatcgct ccacggttct gttgacggat 4321 gctgactttg gagaggcagc taagcagaag tccctgacgg tcactcacac ggtccattac 4381 caatcggtgt ctcaggccac tgggccctta gtggatgttt cagacgctcg gccgggaacg 4441 aatcccacca ccaggaggaa tgccaaggct gggcccacag cgagaaaccg ctatgccagc 4501 cagtggaccc tcaaccgacc ccaccccacc atctcagcac acaccctcac cacagactgg 4561 aggctgccaa cacccagggc tgcaggatca gtagacaaag agagcgacag ttacagcgtc 4621 agcccctcgc aagacacaga tcgagcaaga agcagcatgg tctccacaga aagtgcctcc 4681 tccacttacg aagaactggc cagggcctac gaacacgcca agatggaaga gcaactgagg 4741 cacgccaagt tcaccatcac ggagtgcttc atatcagaca cgtcatcgga gcagttgacg 4801 gcagggacaa atgagtacac ggacagtctg acctccagca ccccttccga atcgggaatc 4861 tgcaggttca ctgcatctcc ccccaaacct caggatggag gaagagtaat gaatatggca 4921 gttccaaagg cacatcggcc aggtggtcca ggcaccagca gggacctgag cttaggacaa 4981 gcatgcttgg aacctcagaa aagccggacc ctgaagcgcc ccacggtcct ggagcccatc 5041 ccgatggaag ccgcctcctc cgcctcctcc acgagagaag gacagtcgtg gcagccgggg 5101 gccgtggcca cattacctca gcgggaggga gcagagctgg gacaggcagc taaaatgagc 5161 agctcccaag aatcactgct cgactcccgg ggccatttga aaggaaacaa tccttacgca 5221 aaatcttaca ccctggtata acagacagca tgactggaca gcggttgtaa atacaattca 5281 aacaattcaa tcaaagctac ctttttttta cggaattcca atatttataa ttaaagaaaa 5341 ttgccaaaat atattaaaaa aaaaaaaaaa aaaa //