LOCUS       AF289030                5374 bp    mRNA    linear   HUM 26-JUL-2016
DEFINITION  Homo sapiens Down syndrome cell adhesion molecule splice variant
            (DSCAM) mRNA, partial cds.
ACCESSION   AF289030
VERSION     AF289030.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 5374)
  AUTHORS   Agarwala,K.L., Suzuki,T. and Yamakawa,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JUL-2000) Neurogenetics, RIKEN Brain Science, 2-1,
            Hirosawa, Wako-shi, Saitama 351-0198, Japan
FEATURES             Location/Qualifiers
     source          1..5374
                     /db_xref="H-InvDB:HIT000076375"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="21"
                     /map="21q22.2-22.3"
     gene            <1..5374
                     /gene="DSCAM"
     CDS             <1..5241
                     /gene="DSCAM"
                     /note="DSCI1"
                     /codon_start=1
                     /product="Down syndrome cell adhesion molecule splice
                     variant"
                     /protein_id="AAL56711.1"
                     /translation="LGHPEPDYRWLKDNMPLELSGRFQKTVTGLLIENIRPSDSGSYV
                     CEVSNRYGTAKVIGRLYVKQPLKATISPRKVKSSVGSQVSLSCSVTGTEDQELSWYRN
                     GEILNPGKNVRITGINHENLIMDHMVKSDGGAYQCFVRKDKLSAQDYVQVVLEDGTPK
                     IISAFSEKVVSPAEPVSLMCNVKGTPLPTITWTLDDDPILKGGSHRISQMITSEGNVV
                     SYLNISSSQVRDGGVYRCTANNSAGVVLYQARINVRGPASIRPMKNITAIAGRDTYIH
                     CRVIGYPYYSIKWYKNSNLLPFNHRQVAFENNGTLKLSDVQKEVDEGEYTCNVLVQPQ
                     LSTSQSVHVTVKVPPFIQPFEFPRFSIGQRVFIPCVVVSGDLPITITWQKDGRPIPGS
                     LGVTIDNIDFTSSLRISNLSLMHNGNYTCIARNEAAAVEHQSQLIVRVPPKFVVQPRD
                     QDGIYGKAVILNCSAEGYPVPTIVWKFSKGAGVPQFQPIALNGRIQVLSNGSLLIKHV
                     VEEDSGYYLCKVSNDVGADVSKSMYLTVKIPAMITSYPNTTLATQGQKKEMSCTAHGE
                     KPIIVRWEKEDRIINPEMARYLVSTKEVGEEVISTLQILPTVREDSGFFSCHAINSYG
                     EDRGIIQLTVQEPPDPPEIEIKDVKARTITLRWTMGFDGNSPITGYDIECKNKSDSWD
                     SAQRTKDVSPQLNSATIIDIHPSSTYSIRMYAKNRIGKSEPSNELTITADEAAPDGPP
                     QEVHLEPISSQSIRVTWKAPKKHLQNGIIRGYQIGYREYSTGGNFQFNIISVDTSGDS
                     EVYTLDNLNKFTQYGLVVQACNRAGTGPSSQEIITTTLEDVPSYPPENVQAIATSPES
                     ISISWSTLSKEALNGILQGFRVIYWANLMDGELGEIKNITTTQPSLELDGLEKYTNYS
                     IQVLAFTRAGDGVRSEQIFTRTKEDVPGPPAGVKAAAASASMVFVSWLPPLKLNGIIR
                     KYTVFCSHPYPTVISEFEASPDSFSYRIPNLSRNRQYSVWVVAVTSAGRGNSSEIITV
                     EPLAKAPARILTFSGTVTTPWMKDIVLPCKAVGDPSPAVKWMKDSNGTPSLVTIDGRR
                     SIFSNGSFIIRTVKAEDSGYYSCIANNNWGSDEIILNLQVQVPPDQPRLTVSKTTSSS
                     ITLSWLPGDNGGSSIRGYILQYSEDNSEQWGSFPISPSERSYRLENLKCGTWYKFTLT
                     AQNGVGPGRISEIIEAKTLGKEPQFSKEQELFASINTTRVRLNLIGWNDGGCPITSFT
                     LEYRPFGTTVWTTAQRTSLSKSYILYDLQEATWYELQMRVCNSAGCAEKQANFATLNY
                     DGSTIPPLIKSVVQNEEGLTTNEGLKMLVTISCILVGVLLLFVLLLVVRRRRREQRLK
                     RLRDAKSLAEMLMSKNTRTSDTLSKQQQTLRMHIDIPRAQLLIEERDTMETIDDRSTV
                     LLTDADFGEAAKQKSLTVTHTVHYQSVSQATGPLVDVSDARPGTNPTTRRNAKAGPTA
                     RNRYASQWTLNRPHPTISAHTLTTDWRLPTPRAAGSVDKESDSYSVSPSQDTDRARSS
                     MVSTESASSTYEELARAYEHAKMEEQLRHAKFTITECFISDTSSEQLTAGTNEYTDSL
                     TSSTPSESGICRFTASPPKPQDGGRVMNMAVPKAHRPGGPGTSRDLSLGQACLEPQKS
                     RTLKRPTVLEPIPMEAASSASSTREGQSWQPGAVATLPQREGAELGQAAKMSSSQESL
                     LDSRGHLKGNNPYAKSYTLV"
BASE COUNT         1452 a         1450 c         1373 g         1099 t
ORIGIN      
        1 ctcgggcacc ctgagccaga ttaccgctgg ctgaaggaca acatgcccct ggaactttca
       61 gggaggttcc agaagaccgt gacggggctg ctcattgaga acattcgccc ctcggactca
      121 ggcagctatg tttgtgaagt gtccaacaga tacggaactg ctaaggtgat aggccgcctg
      181 tacgtgaaac agccactgaa agccaccatc agtcccagga aggttaaaag cagcgtgggt
      241 agccaagttt ccttgtcctg cagcgtgaca ggaactgagg accaggaact ctcctggtac
      301 cgcaatggtg aaatcctcaa ccctggaaaa aatgtgagga tcacagggat caaccacgaa
      361 aaccttataa tggatcacat ggtcaaaagt gacgggggcg cataccagtg ctttgtgcgc
      421 aaggacaagc tgtccgctca agactatgtg caggtggtcc ttgaagatgg aactcccaaa
      481 attatttctg cctttagtga aaaggtggtg agtccagcag agccggtttc ccttatgtgc
      541 aacgtgaagg gaacaccttt gcccacgatc acgtggaccc tggacgatga cccgattctc
      601 aagggtggca gtcaccgcat cagccagatg atcacgtcgg aggggaacgt ggtcagctac
      661 ctgaacatct ccagctccca ggtccgggac gggggagtct accgctgcac tgccaacaac
      721 tcggcgggag tcgtcctgta ccaggctcga ataaacgtaa gagggcctgc aagcattcga
      781 ccaatgaaaa acatcacagc aatagcagga cgggacacat acattcactg tcgtgtgatt
      841 ggctatccgt attactccat taaatggtac aagaactcta acctgcttcc tttcaaccac
      901 cgccaagtgg catttgagaa caatggaact cttaaacttt cagatgtgca aaaggaagtg
      961 gacgaggggg agtacacgtg caacgtgttg gttcaaccac aactctccac cagccagagc
     1021 gtccacgtga ccgtgaaagt tccgcctttc atacaaccct ttgagtttcc aagattctcc
     1081 attgggcagc gggtcttcat cccctgtgtt gtggtctcag gggacttacc catcacgatc
     1141 acctggcaga aggatggccg gccaatccct gggagccttg gggtgaccat tgacaatatt
     1201 gacttcacga gctccttgag gatttccaat ctctcgctca tgcacaatgg gaattacacc
     1261 tgcatagccc ggaatgaggc cgccgctgtg gagcaccaaa gccagttgat tgtcagagtt
     1321 cctcccaagt ttgtggttca gccacgggac caggacggga tttatggcaa agcagtcatc
     1381 ctcaattgtt ctgctgaggg ttaccctgta cctaccatcg tgtggaaatt ctctaaaggt
     1441 gctggggttc cccagttcca gccaattgcc ctaaatggcc gaatccaagt tctcagcaat
     1501 gggtcgttgc tgatcaagca tgtcgtggag gaagacagtg gctactacct ctgcaaggtc
     1561 agcaacgatg tgggcgcaga cgtcagcaag tccatgtacc tcacggttaa aattcctgcg
     1621 atgataacat cctatccaaa tactaccctg gccacgcagg ggcagaaaaa ggagatgagc
     1681 tgcacggcgc atggtgagaa gcccattata gtccgctggg agaaggagga ccgaatcatt
     1741 aaccctgaga tggcccgtta tcttgtgtcc accaaggagg tgggagaaga ggtgatttct
     1801 actctgcaga ttttgccaac tgtgagagaa gattctggtt tcttttcctg ccatgctatt
     1861 aattcttatg gggaggaccg tggaataatt cagctcacag tgcaagagcc cccagaccct
     1921 cccgaaattg agatcaaaga tgtcaaagca cgcacaatta cgctcaggtg gaccatgggg
     1981 tttgatggaa acagtcccat cacaggctac gatattgaat gcaaaaataa atcagactcc
     2041 tgggattctg ctcagagaac caaagatgtt tcccctcagc tgaactcggc caccatcatt
     2101 gatatccacc cttcctccac ctacagcatc cgcatgtacg ccaagaaccg gattggcaag
     2161 agcgagccca gcaacgagct caccatcacg gcggacgagg cagctcctga tggtccacct
     2221 caggaagttc acctggagcc tatatcatct cagagcatca gggtcacatg gaaggctccc
     2281 aagaaacatt tgcaaaatgg gattatccgt ggctaccaaa taggttaccg agagtacagc
     2341 actgggggta acttccaatt caacattatc agtgtcgaca ccagcgggga cagtgaggtt
     2401 tacaccctgg acaacctgaa taagttcact cagtacggcc tggtggtgca ggcctgtaac
     2461 cgggccggca cggggccttc ttctcaggaa atcatcacca ccactctcga ggatgtgccc
     2521 agttaccccc ccgaaaatgt ccaagccata gcaacatcac cagaaagcat atcaatatcc
     2581 tggtccacac tttccaagga agccttgaat ggaattctcc aggggttcag agtcatttac
     2641 tgggccaacc tcatggacgg agagctgggt gagattaaaa acatcaccac cacacagcct
     2701 tcactggagc tggacgggct ggaaaagtac accaactaca gcatccaggt gctggccttc
     2761 acccgcgcag gagacggggt caggagtgag cagatcttca cccggaccaa agaggatgtt
     2821 ccaggtcctc ccgcgggtgt gaaggcagcg gcggcctcag cctccatggt ctttgtgtcc
     2881 tggcttcccc ctctcaagct gaacggcatc atccgaaagt acactgtatt ctgctcccac
     2941 ccctatccca cagtgatcag cgagtttgag gcctctcccg actcgttttc ctacagaatt
     3001 cccaacctga gtaggaatcg tcagtacagc gtctgggtgg tggctgttac ttcagccgga
     3061 agaggcaaca gcagtgaaat catcacagtc gagccactag caaaagctcc tgcacgaatc
     3121 ctgaccttca gtgggacagt gactactcca tggatgaaag acattgtctt gccttgtaag
     3181 gctgttgggg acccttctcc tgcagtcaaa tggatgaaag acagtaacgg gacacccagt
     3241 ctagtaacga ttgatgggcg gaggagcatc tttagcaacg gaagcttcat tattcgcacg
     3301 gtgaaagcag aagactccgg ctattacagc tgcattgcca ataacaactg gggatctgat
     3361 gaaattattt taaacttaca agtacaagtt ccaccagatc agcctcggct tacagtctcc
     3421 aagaccacgt cttcctccat caccctttct tggctccctg gagacaacgg gggcagctct
     3481 atcagaggat acatactgca gtactccgag gacaatagtg agcagtgggg gagttttcca
     3541 atcagcccca gcgaacgttc ctatcgcttg gaaaatctca aatgtgggac ttggtataag
     3601 ttcacactga cagcccaaaa tggagtgggc ccagggcgca taagtgaaat catagaagca
     3661 aagaccttag gaaaagagcc ccagttctca aaggagcagg agctgtttgc cagcatcaac
     3721 accacacgcg tgaggctgaa cctcattggc tggaatgatg gcggctgccc catcacctcc
     3781 ttcacactag agtacaggcc ctttgggacc acagtttgga ccacagctca gaggacctct
     3841 ctctccaagt cctacatcct gtatgacctg caggaagcca cctggtatga gctgcagatg
     3901 cgggtgtgca acagtgcggg ctgcgcggag aagcaggcca acttcgctac gctgaactac
     3961 gatggcagta caattcctcc actcattaag tcagttgtcc aaaacgaaga agggctgacg
     4021 accaacgagg ggctcaagat gctggtgacc atctcctgta tcctggtggg ggtcttgctg
     4081 ctgtttgtgc tcctgctggt tgtgcggagg aggcggcggg agcagaggct aaagaggctg
     4141 cgagatgcaa agagtttagc tgaaatgctc atgagtaaga atacccggac ttcagatacg
     4201 ttaagcaagc aacagcagac cctgcgaatg cacatcgaca tacccagggc tcagcttttg
     4261 attgaagaga gagacacgat ggagaccatt gatgatcgct ccacggttct gttgacggat
     4321 gctgactttg gagaggcagc taagcagaag tccctgacgg tcactcacac ggtccattac
     4381 caatcggtgt ctcaggccac tgggccctta gtggatgttt cagacgctcg gccgggaacg
     4441 aatcccacca ccaggaggaa tgccaaggct gggcccacag cgagaaaccg ctatgccagc
     4501 cagtggaccc tcaaccgacc ccaccccacc atctcagcac acaccctcac cacagactgg
     4561 aggctgccaa cacccagggc tgcaggatca gtagacaaag agagcgacag ttacagcgtc
     4621 agcccctcgc aagacacaga tcgagcaaga agcagcatgg tctccacaga aagtgcctcc
     4681 tccacttacg aagaactggc cagggcctac gaacacgcca agatggaaga gcaactgagg
     4741 cacgccaagt tcaccatcac ggagtgcttc atatcagaca cgtcatcgga gcagttgacg
     4801 gcagggacaa atgagtacac ggacagtctg acctccagca ccccttccga atcgggaatc
     4861 tgcaggttca ctgcatctcc ccccaaacct caggatggag gaagagtaat gaatatggca
     4921 gttccaaagg cacatcggcc aggtggtcca ggcaccagca gggacctgag cttaggacaa
     4981 gcatgcttgg aacctcagaa aagccggacc ctgaagcgcc ccacggtcct ggagcccatc
     5041 ccgatggaag ccgcctcctc cgcctcctcc acgagagaag gacagtcgtg gcagccgggg
     5101 gccgtggcca cattacctca gcgggaggga gcagagctgg gacaggcagc taaaatgagc
     5161 agctcccaag aatcactgct cgactcccgg ggccatttga aaggaaacaa tccttacgca
     5221 aaatcttaca ccctggtata acagacagca tgactggaca gcggttgtaa atacaattca
     5281 aacaattcaa tcaaagctac ctttttttta cggaattcca atatttataa ttaaagaaaa
     5341 ttgccaaaat atattaaaaa aaaaaaaaaa aaaa
//