LOCUS AH009794 2899 bp DNA linear HUM 10-JUN-2016
DEFINITION Homo sapiens chromosome 1 signaling lymphocytic activation molecule
(SLAM) gene, partial cds.
ACCESSION AH009794 AF252303 AF252304 AF252305
VERSION AH009794.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2899)
AUTHORS Ferrand,V., Li,C., Romeo,G. and Yin,L.
TITLE Absence of SLAM mutations in EBV-associated lymphoproliferative
disease patients
JOURNAL J. Med. Virol. 70 (1), 131-136 (2003)
PUBMED 12629654
REFERENCE 2 (bases 1 to 2899)
AUTHORS Ferrand,V.M., Yin,L. and Romeo,G.
TITLE Genomic organization of human SLAM
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 2899)
AUTHORS Ferrand,V.M., Yin,L. and Romeo,G.
TITLE Direct Submission
JOURNAL Submitted (05-APR-2000) GCS Unit, International Agency for Research
on Cancer, 150, Cours Albert Thomas, Lyon 69372 cedex 08, France
COMMENT On or before Jun 10, 2016 this sequence version replaced
AF252303.1, AF252304.1, AF252305.1, AH009794.1.
FEATURES Location/Qualifiers
source 1..2899
/organism="Homo sapiens"
/mol_type="genomic DNA"
/db_xref="taxon:9606"
/chromosome="1"
/map="1q21.3-q23"
gene <1..>2899
/gene="SLAM"
mRNA join(<733..1071,1893..>2177)
/gene="SLAM"
/product="signaling lymphocytic activation molecule"
CDS join(<733..1071,1893..>2177)
/gene="SLAM"
/codon_start=3
/product="signaling lymphocytic activation molecule"
/protein_id="AAG10433.1"
/translation="GRMMNCPKILRQLGSKVLLPLTYERINKSMNKSIHIVVTMAKSL
ENSVENKIVSLDPSEAGPPRYLGDRYKFYLENLTLGIRESRKEDEGWYLMTLEKNVSV
QRFCLQLRLYEQVSTPEIKVLNKTQENGTCTLILGCTVEKGDHVAYSWSEKAGTHPLN
PANSSHLLSLTLGPQHADNIYICTVSNPISNNSQTFSPWPGCRTDPS"
exon 733..1071
/gene="SLAM"
/number=2
gap 1457..1556
/estimated_length=unknown
exon 1893..2177
/gene="SLAM"
/number=3
gap 2283..2382
/estimated_length=unknown
mRNA <2513..>2586
/gene="SLAM"
/product="signaling lymphocytic activation molecule"
CDS <2513..>2586
/gene="SLAM"
/codon_start=3
/product="signaling lymphocytic activation molecule"
/protein_id="AAG10434.1"
/translation="KTNHYQTTVEKKSLTIYAQVQKPG"
exon 2513..2586
/gene="SLAM"
/number=5
BASE COUNT 767 a 579 c 647 g 706 t
ORIGIN
1 attaaagggg gaaggggaag gaaaaaaaag gggggggggg gagggacaat gggggagacc
61 cccggggttt gggaaggttt tcccgaaaat tctgggggga acattgttgg ggtaaacccg
121 gacaatgtag gtgattttac ttttgccact tttgaaggaa cgtaattcct tggctttatt
181 tcagggtgtt tggagagaga ggattccaca gtttgaacac tgggcttatc acttcctgac
241 tccacattcc tcagattttt ctgttttcct catgatctga aatgcttcct gggctcatga
301 gctcagaatc acttttattt gctctccatc cttcatcctg tatattcaat ggtggaaaaa
361 accctggtag aggaattagc agaactgaat tctaatcctg actctgccac ttactagtta
421 gggaagccat ttaacttctc tgtgcttttt agatgcctga acaataaatc tgagttgata
481 aagacccagt actctagtta atctatacaa ctctatccta agtaatttga agatttctat
541 tgacagtttt gaagtattga gaatatagtg gggatcctca aggcagttct tatagaccac
601 gaaggacttg gcaaccccag ggatagccaa agaggaagag ggagagcctc cagtctgtcc
661 ttcctgatct gctgacacga tgttgtctaa aggccttaat aataagggac tctcttctcc
721 tccctcccac aggtgggcgc atgatgaact gcccaaagat tctccggcag ttgggaagca
781 aagtgctgct gcccctgaca tatgaaagga taaataagag catgaacaaa agcatccaca
841 ttgtcgtcac aatggcaaaa tcactggaga acagtgtcga gaacaaaata gtgtctcttg
901 atccatccga agcaggccct ccacgttatc taggagatcg ctacaagttt tatctggaga
961 atctcaccct ggggatacgg gaaagcagga aggaggatga gggatggtac cttatgaccc
1021 tggagaaaaa tgtttcagtt cagcgctttt gcctgcagtt gaggctttat ggtaataatg
1081 gcggcttccc cagtccacac taaagggcca aggtgctcct ttgaccaaga atttaggtct
1141 ctcttaaaag caaagggtat tcagaattgg aagtaactag aatgatcttc tagtttgggg
1201 gtatttaaac ctgctgcatg gaagacgttt taaaggttga catttttttt tccaaattgc
1261 atattgatgg tagctgatta agcattagtt actcttactc ccatttccca aaggaaaggg
1321 gcacagctcc ttgtgggctg gagggccgat agacccaagg atcttggttt gcaagtaata
1381 ttttatttga aaataggatt tttttctgat taaaagaagt tgaataccac agatcaaacc
1441 cagtctctcc tacatgnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
1501 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnntggt
1561 ggattagttg acagcaaact ccactgatag gagacaggag aattagcaac ttaggtcaag
1621 gacatcagga agggcgagtg gagccctaac aatattggta gaagaggcct aaaaagcaaa
1681 ttcttatttt ctattttatc ccaaggtggt cttagatagg atgtagtggg gcatgatgga
1741 cagtgtgaag caatagattc cccactagaa ataaatcaca ttgaggggga gggaaaatgc
1801 cattaggctg tactttgttc taacaaaaag gtcaagtgag aattcccagg ggttcacttc
1861 agtgatggct cccttcctcc cactcctgac agagcaggtc tccactccag aaattaaagt
1921 tttaaacaag acccaggaga acgggacctg caccttgata ctgggctgca cagtggagaa
1981 gggggaccat gtggcttaca gctggagtga aaaggcgggc acccacccac tgaacccagc
2041 caacagctcc cacctcctgt ccctcaccct cggcccccag catgctgaca atatctacat
2101 ctgcaccgtg agcaacccta tcagcaacaa ttcccagacc ttcagcccgt ggcccggatg
2161 caggacagac ccctcaggtg agtacactgg tggcagcctg tgtgccacct taatgagcat
2221 gggctcagtc ttcacatggt ccaattgctc cccagccatg gcattcacct tagtaacaat
2281 acnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
2341 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nngactcagg gctttgtttc
2401 cattgtgccc ttggggaaag tgggtatgca aaggacagta aagaccaggt ctgagtaagg
2461 agctcctgct ggggaccaga gggagataac cattatggtt tcttttcacc aggtaaaacg
2521 aaccattacc agacaacagt ggaaaaaaaa agccttacga tctatgccca agtccagaaa
2581 ccaggtgtaa gttctatatt ttgtttgaga tgaacctgtc atgtttccta gagtattcct
2641 ggccagtcta ccttgcctgt tggacattca cagttttcca tccagagcag aggaaggtag
2701 ggaacaggag tcaagaacaa gagttctcct aaagtcacta aacgtcagtg tttgaaataa
2761 tgggcaacac tggataattt tctggtcatg agtcttcaca ggaaaaaaat gaagaagctg
2821 gaaatacata ctgtatgact ctttccagct ctggcattgt aggagtctag gttccatgtt
2881 agtcaattat ttccttttc
//