LOCUS       AF117960                 965 bp    DNA     linear   BCT 26-JUL-2016
DEFINITION  Pseudomonas agarici strain LMG 2112 OprF (oprF) gene, partial cds.
ACCESSION   AF117960
VERSION     AF117960.1
KEYWORDS    .
SOURCE      Pseudomonas agarici
  ORGANISM  Pseudomonas agarici
            Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
            Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 965)
  AUTHORS   Vermeiren,H., Willems,A., Schoofs,G., de Mot,R., Keijers,V., Hai,W.
            and Vanderleyden,J.
  TITLE     The rice inoculant strain Alcaligenes faecalis A15 is a
            nitrogen-fixing Pseudomonas stutzeri
  JOURNAL   Syst. Appl. Microbiol. 22 (2), 215-224 (1999)
   PUBMED   10390872
  REMARK    submitted
REFERENCE   2  (bases 1 to 965)
  AUTHORS   Vermeiren,H., Willems,A., Schoofs,G., De Mot,R., Keijers,V. and
            Vanderleyden,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-JAN-1999) Applied Plant Sciences, Catholic University
            Leuven, F. A. Janssens Laboratory of Genetics, Kardinaal
            Mercierlaan 92, Heverlee-Leuven B-3001, Belgium
FEATURES             Location/Qualifiers
     source          1..965
                     /organism="Pseudomonas agarici"
                     /mol_type="genomic DNA"
                     /strain="LMG 2112"
                     /type_material="type strain of Pseudomonas agarici"
                     /db_xref="taxon:46677"
     gene            1..>965
                     /gene="oprF"
     CDS             1..>965
                     /gene="oprF"
                     /note="outer membrane protein; porin"
                     /codon_start=1
                     /transl_table=11
                     /product="OprF"
                     /protein_id="AAD24552.1"
                     /translation="MKLKNTLGIAVGTLVAATSFGVLAQGQGAVEGELFYGKKYNDSV
                     NHVEDGYQPGASIGYFLTDDVSVNLTYGKDNHTRSNDGTGNQKIRGDQFGLNSQYHFG
                     SVGDAIRPYVQGGVKYGTLTNVAATGHTGRDQSTFLTAGAGAKWYITDNLYARAGVEA
                     DYKLDNGQWDYIPSIGLGVNFGGSGGKVAAAPAPAPVAEEPAPVAEAPVAEMVKVQLD
                     VKFDFDKSVVKPNSYADIKNLADFMKQYPQTSTVVKGYTDNVGTDAYNQKLSERRAHA
                     VAQVLTNQYGVEQSRVSSLGYGKNNPAASNATKEGQAINRRVEASV"
BASE COUNT          228 a          276 c          269 g          192 t
ORIGIN      
        1 gtgaaactga aaaacacctt gggcattgcc gttggtacac ttgtagccgc aacttcgttc
       61 ggcgtcctgg cacaaggcca aggcgcggtc gagggtgagc tgttctacgg caagaagtac
      121 aacgacagcg tcaaccacgt tgaagacggc tatcagccag gcgcgagcat tggctacttc
      181 ttgaccgacg acgtttccgt caacctgacc tacggcaagg acaaccacac tcgttcgaac
      241 gacggcactg gcaatcagaa gatccgtggc gatcagttcg gtctgaacag ccagtatcac
      301 ttcggtagcg ttggcgatgc gatccgtcca tacgttcaag gtggcgtgaa gtacggcacc
      361 ctgaccaacg tggctgctac cggccacacc ggtcgtgacc agtcgacctt cctgaccgct
      421 ggcgctggcg ccaagtggta catcaccgac aatctgtacg ctcgtgccgg tgttgaagcc
      481 gactacaagc tggacaacgg tcagtgggac tacatcccta gcattggtct gggcgtgaac
      541 ttcggtggta gcggtggcaa ggttgctgca gcacctgctc cagctccagt tgccgaagag
      601 ccagcaccgg ttgcagaagc tccagtcgct gaaatggtca aggttcagtt ggacgtgaag
      661 ttcgacttcg acaagtcggt cgtcaagcct aacagctatg ccgacatcaa gaacctggct
      721 gacttcatga agcagtaccc tcagaccagc accgtggtta aaggctatac cgataacgtc
      781 ggtaccgatg cctacaacca gaagctgtcc gagcgtcgtg ctcatgctgt cgcacaagtg
      841 ctgaccaatc agtatggcgt tgagcaatct cgcgttagct cgctgggcta cggtaagaac
      901 aatccggctg ccagcaacgc caccaaagaa ggccaagcta tcaaccgtcg cgtagaagct
      961 tctgt
//