LOCUS AH007112 5877 bp DNA linear HUM 10-JUN-2016
DEFINITION Homo sapiens alphaE-catenin (CTNNA1) gene, complete cds.
ACCESSION AH007112 AF102786 AF102787 AF102788 AF102789 AF102790 AF102791
AF102792 AF102793 AF102794 AF102795 AF102796 AF102797 AF102798
AF102799 AF102800 AF102801 AF102802 AF102803
VERSION AH007112.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5877)
AUTHORS Linkels,M., Bussemakers,M.J., Nollet,F., Ewing,C.M., van Roy,F. and
Schalken,J.A.
TITLE Molecular cloning of an alternative human alphaE-catenin cDNA
JOURNAL Biochem. Biophys. Res. Commun. 237 (1), 177-181 (1997)
PUBMED 9266853
REFERENCE 2 (bases 1 to 5877)
AUTHORS Nollet,F.H., Vanpoucke,G.G. and van Roy,F.M.
TITLE Genomic Organization of the Human AlphaE-Catenin Gene (CTNNA1)
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 5877)
AUTHORS Nollet,F.H., Vanpoucke,G.G. and van Roy,F.M.
TITLE Direct Submission
JOURNAL Submitted (30-OCT-1998) Department of Molecular Biology,
V.I.B.-University of Ghent, Ledeganckstraat 35, Ghent 9000, Belgium
COMMENT On or before Jun 10, 2016 this sequence version replaced
AF102786.1, AF102787.1, AF102788.1, AF102789.1, AF102790.1,
AF102791.1, AF102792.1, AF102793.1, AF102794.1, AF102795.1,
AF102796.1, AF102797.1, AF102798.1, AF102799.1, AF102800.1,
AF102801.1, AF102802.1, AF102803.1, AH007112.1.
FEATURES Location/Qualifiers
source 1..5877
/organism="Homo sapiens"
/mol_type="genomic DNA"
/db_xref="taxon:9606"
mRNA join(13..101,226..332,457..652,777..943,1068..1187,
1312..1581,1706..1909,2034..2114,2239..2391,2516..2608,
2733..2889,3014..3214,3339..3490,3615..3725,3850..4031,
4156..4261,4386..4520,4645..5877)
/product="alphaE-catenin"
exon 13..101
/number=1
gap 114..213
/estimated_length=unknown
exon 226..332
/number=2
gene 228..4932
/gene="CTNNA1"
CDS join(228..332,457..652,777..943,1068..1187,1312..1581,
1706..1909,2034..2114,2239..2391,2516..2608,2733..2889,
3014..3214,3339..3490,3615..3725,3850..4031,4156..4261,
4386..4520,4645..4932)
/gene="CTNNA1"
/codon_start=1
/product="alphaE-catenin"
/protein_id="AAC99459.1"
/translation="MTAVHAGNINFKWDPKSLEIRTLAVERLLEPLVTQVTTLVNTNS
KGPSNKKRGRSKKAHVLAASVEQATENFLEKGDKIAKESQFLKEELVAAVEDVRKQGD
LMKAAAGEFADDPCSSVKRGNMVRAARALLSAVTRLLILADMADVYKLLVQLKVVEDG
ILKLRNAGNEQDLGIQYKALKPEVDKLNIMAAKRQQELKDVGHRDQMAAARGILQKNV
PILYTASQACLQHPDVAAYKANRDLIYKQLQQAVTGISNAAQATASDDASQHQGGGGG
ELAYALNNFDKQIIVDPLSFSEERFRPSLEERLESIISGAALMADSSCTRDDRRERIV
AECNAVRQALQDLLSEYMGNAGRKERSDALNSAIDKMTKKTRDLRRQLRKAVMDHVSD
SFLETNVPLLVLIEAAKNGNEKEVKEYAQVFREHANKLIEVANLACSISNNEEGVKLV
RMSASQLEALCPQVINAALALAAKPQSKLAQENMDLFKEQWEKQVRVLTDAVDDITSI
DDFLAVSENHILEDVNKCVIALQEKDVDGLDRTAGAIRGRAARVIHVVTSEMDNYEPG
VYTEKVLEATKLLSNTVMPRFTEQVEAAVEALSSDPAQPMDENEFIDASRLVYDGIRD
IRKAVLMIRTPEELDDSDFETEDFDVRSRTSVQTEDDQLIAGQSARAIMAQLPQEQKA
KIAEQVASFQEEKSKLDAEVSKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTS
DVISAAKKIAEAGSRMDKLGRTIADHCPDSACKQDLLAYLQRIALYCHQLNICSKVKA
EVQNLGGELVVSGVDSAMSLIQAAKNLMNAVVQTVKASYVASTKYQKSQGMASLNLPA
VSWKMKAPEKKPLVKREKQDETQTKIKRASQKKHVNPVQALSEFKAMDSI"
gap 345..444
/estimated_length=unknown
exon 457..652
/gene="CTNNA1"
/number=3
gap 665..764
/estimated_length=unknown
exon 777..943
/gene="CTNNA1"
/number=4
gap 956..1055
/estimated_length=unknown
exon 1068..1187
/gene="CTNNA1"
/number=5
variation 1139
/gene="CTNNA1"
/note="polymorphism"
/replace="c"
gap 1200..1299
/estimated_length=unknown
exon 1312..1581
/gene="CTNNA1"
/number=6
gap 1594..1693
/estimated_length=unknown
exon 1706..1909
/gene="CTNNA1"
/number=7
gap 1922..2021
/estimated_length=unknown
exon 2034..2114
/gene="CTNNA1"
/number=8
variation 2122
/gene="CTNNA1"
/note="polymorphism"
/replace="g"
gap 2127..2226
/estimated_length=unknown
exon 2239..2391
/gene="CTNNA1"
/number=9
gap 2404..2503
/estimated_length=unknown
exon 2516..2608
/gene="CTNNA1"
/number=10
gap 2621..2720
/estimated_length=unknown
exon 2733..2889
/gene="CTNNA1"
/number=11
variation 2748
/gene="CTNNA1"
/note="polymorphism"
/replace="t"
gap 2902..3001
/estimated_length=unknown
exon 3014..3214
/gene="CTNNA1"
/number=12
gap 3227..3326
/estimated_length=unknown
exon 3339..3490
/gene="CTNNA1"
/number=13
gap 3503..3602
/estimated_length=unknown
exon 3615..3725
/gene="CTNNA1"
/number=14
gap 3738..3837
/estimated_length=unknown
exon 3850..4031
/gene="CTNNA1"
/number=15
gap 4044..4143
/estimated_length=unknown
exon 4156..4261
/gene="CTNNA1"
/number=16
variation 4183
/gene="CTNNA1"
/note="polymorphism"
/replace="a"
variation 4189
/gene="CTNNA1"
/note="polymorphism"
/replace="g"
gap 4274..4373
/estimated_length=unknown
exon 4386..4520
/gene="CTNNA1"
/number=17
gap 4533..4632
/estimated_length=unknown
exon 4645..5877
/number=18
regulatory 5533..5538
/regulatory_class="polyA_signal_sequence"
regulatory 5852..5857
/regulatory_class="polyA_signal_sequence"
BASE COUNT 1181 a 923 c 1038 g 1035 t
ORIGIN
1 ggggcggccc atttcctcct cctagccgga ctggagggag acaaagcagc gcccgtctgc
61 ttcgggcctc tggaatttag cgctcgccca gctagccgca ggtaacttcg tacnnnnnnn
121 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
181 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnntttctta tttagaaatg actgctgtcc
241 atgcaggcaa cataaacttc aagtgggatc ctaaaagtct agagatcagg actctggcag
301 ttgagagact gttggagcct cttgttacac aggtaagaat ctgannnnnn nnnnnnnnnn
361 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
421 nnnnnnnnnn nnnnnnnnnn nnnntgaaac ttttaggtta caacccttgt aaacaccaat
481 agtaaagggc cctctaataa gaagagaggt cgttctaaga aggcccatgt tttggctgca
541 tctgttgaac aagcaactga gaatttcttg gagaaggggg ataaaattgc gaaggagagc
601 cagtttctca aggaggagct tgtggctgct gtagaagatg ttcgaaaaca aggtaggtca
661 ttacnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
721 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnntctgta aaacaggtga
781 tttgatgaag gctgctgcag gagagttcgc agatgatccc tgctcttctg tgaagcgagg
841 caacatggtt cgggcagctc gagctttgct ctctgctgtt acccggttgc tgattttggc
901 tgacatggca gatgtctaca aattacttgt tcagctgaaa gttgtaagta tacagnnnnn
961 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
1021 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnncttat tttataggtg gaagatggta
1081 tcttgaagtt gaggaatgct ggcaatgaac aagacttagg aatccagtat aaagccctaa
1141 aacctgaagt ggataagctg aacattatgg cagccaaaag acaacaggta cagtcatgan
1201 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
1261 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnt tactcttgta ggaattgaaa
1321 gatgttggcc atcgtgatca gatggctgca gctagaggaa tcctgcagaa gaacgttccg
1381 atcctctata ctgcatccca ggcatgccta cagcaccctg atgtcgcagc ctataaggcc
1441 aacagggacc tgatatacaa gcagctgcag caggcggtca caggcatttc caatgcagcc
1501 caggccactg cctcagacga tgcctcacag caccagggtg gaggaggagg agaactggca
1561 tatgcactca ataactttga cgtaagttat gctnnnnnnn nnnnnnnnnn nnnnnnnnnn
1621 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
1681 nnnnnnnnnn nnnctttctc tgcagaaaca aatcattgtg gaccccttga gcttcagcga
1741 ggagcgcttt aggccttccc tggaggagcg tctggaaagc atcattagtg gggctgcctt
1801 gatggccgac tcgtcctgca cgcgtgatga ccgtcgtgag cgaattgtgg cagagtgtaa
1861 tgctgtccgc caggccctgc aggacctgct ttcggagtac atgggcaatg tgagtttgac
1921 annnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
1981 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nccttttatc caggctggac
2041 gtaaagaaag aagtgatgca ctcaattctg caatagataa aatgaccaag aagaccaggg
2101 acttgcgtag acaggtaatc tcgatgnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
2161 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
2221 nnnnnnttta atcattagct ccgcaaagct gtcatggacc acgtttcaga ttctttcctg
2281 gaaaccaatg ttccactttt ggtattgatt gaagctgcaa agaatggaaa tgagaaagaa
2341 gttaaggagt atgcccaagt tttccgtgaa catgccaaca aattgattga ggtaagtgaa
2401 ttannnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
2461 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnttatgtt tataggttgc
2521 caacttggcc tgttccatct caaataatga agaaggtgta aagcttgttc gaatgtctgc
2581 aagccagtta gaagccctct gtcctcaggt aaagtacaac nnnnnnnnnn nnnnnnnnnn
2641 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
2701 nnnnnnnnnn nnnnnnnnnn tatcttttgc aggttattaa tgctgcactg gctttagcag
2761 caaaaccaca gagtaaactg gcccaagaga acatggatct ttttaaagaa caatgggaaa
2821 aacaagtccg tgttctcaca gatgctgtcg atgacattac ttccattgat gacttcttgg
2881 ctgtctcagg taatgagctg gnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
2941 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
3001 ncttgttctc cagagaatca cattttggaa gatgtgaaca aatgtgtcat tgctctccaa
3061 gagaaggatg tggatggcct ggaccgcaca gctggtgcaa ttcgaggccg ggcagcccgg
3121 gtcattcacg tagtcacctc agagatggac aactatgagc caggagtcta cacagagaag
3181 gttctggaag ccactaagct gctctccaac acaggtacgg gaactcnnnn nnnnnnnnnn
3241 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
3301 nnnnnnnnnn nnnnnnnnnn nnnnnncttt ctccacagtc atgccacgtt ttactgagca
3361 agtagaagca gccgtggaag ccctcagctc ggaccctgcc cagcccatgg atgagaatga
3421 gtttatcgat gcttcccgcc tggtatatga tggcatccgg gacatcagga aagcagtgct
3481 gatgataagg gtgagtaact gcnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
3541 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
3601 nntctgggtg gcagacccct gaggagttgg atgactctga ctttgagaca gaagattttg
3661 atgtcagaag caggacgagc gtccagacag aagacgatca gctgatagct ggccagagtg
3721 cccgggtaag gaagcgcnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
3781 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnttc
3841 tgatcacagg cgatcatggc tcagcttccc caggagcaaa aagcgaagat tgcggaacag
3901 gtggccagct tccaggaaga aaagagcaag ctggatgctg aagtgtccaa atgggacgac
3961 agtggcaatg acatcattgt gctggccaag cagatgtgca tgattatgat ggagatgaca
4021 gactttaccc ggtgagcagc accnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
4081 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
4141 nnnccctctt ctcagaggta aaggaccact caaaaataca tcggatgtca tcagtgctgc
4201 caagaaaatt gctgaggcag gatccaggat ggacaagctt ggccgcacca ttgcagacca
4261 tgtaagtgac agannnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
4321 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnctctctc
4381 ttcagtgccc cgactcggct tgcaagcagg acctgctggc ctacctgcaa cgcatcgccc
4441 tctactgcca ccagctgaac atctgcagca aggtcaaggc cgaggtgcag aatctcggcg
4501 gggagcttgt tgtctctggg gtaagcatta gcnnnnnnnn nnnnnnnnnn nnnnnnnnnn
4561 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
4621 nnnnnnnnnn nntctgcctc gtaggtggac agcgccatgt ccctgatcca ggcagccaag
4681 aacttgatga atgctgtggt gcagacagtg aaggcatcct acgtcgcctc taccaaatac
4741 caaaagtcac agggtatggc ttccctcaac cttcctgctg tgtcatggaa gatgaaggca
4801 ccagagaaaa agccattggt gaagagagag aaacaggatg agacacagac caagattaaa
4861 cgggcatctc agaagaagca cgtgaacccg gtgcaggccc tcagcgagtt caaagctatg
4921 gacagcatct aagtctgccc aggccggccg cccccacccc tcggggctcc tgaatatcag
4981 tcactgttcg tcactcaaat gaatttgcta aatacaacac tgatactaga ttccacaggg
5041 aaatgggcag actgaaccag tccaggtggt gaattttcca agaacatagt ttaagttgat
5101 taaaaatgct tttagaatgc aggagcctac ttctagctgt attttttgta tgcttaaata
5161 aaaataaaaa ttcataacca aagagaatcc cacattagct tgttagtaat gctctgacca
5221 agccgagatg cccattctct tagtgatggc ggcgttaggg tttgagagaa gggaatttgg
5281 ctcaacttca gttgagaggg tgcagtccag acagcttgac tgcttttaaa tgaccaaaga
5341 tgacctgtgg taagcaacct gggcatctta ggaagcagtc cctggagaag gcatgttccc
5401 agaaaggtct ctggagggac aaactcactc agtaaaacat aatgtatcat gaagaaaact
5461 gattctctat gacatgaaat gaaaatttta atgcattgtt ataattacta atgtacgctg
5521 ctgcaggaca ttaataaagt tgctttttta ggctacagtg tctcgatgcc ataatcagaa
5581 cacacttttt ttcctctttc tcccagcttc aaatgcaaat tcatcattgg gctcacttct
5641 aataactgca gtgtttcccg ccttgggctt gcagcagaaa aacctgacaa catagagttt
5701 gctaaggcag taatttagac tttaccttat ttgtgattac tgtagtgatt gattgattga
5761 ttactattaa ctacaaggta taatttacta tcaccttatt taaattttat gaattaattt
5821 gaatgttttt ttacactaac taacttttcc caataaagtc cactatgaaa ccacgac
//