LOCUS AF014880 2495 bp DNA linear BCT 24-JUL-2016
DEFINITION Enterobacter agglomerans ColE1-like plasmid RNA one modulator (rom)
gene, complete cds.
ACCESSION AF014880
VERSION AF014880.1
KEYWORDS .
SOURCE Pantoea agglomerans
ORGANISM Pantoea agglomerans
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
Erwiniaceae; Pantoea; Pantoea agglomerans group.
REFERENCE 1 (bases 1 to 2495)
AUTHORS Mikiewicz,D., Wrobel,B., Wegrzyn,G. and Plucienniczak,A.
TITLE Isolation and characterization of a ColE1-like plasmid from
Enterobacter agglomerans with a novel variant of rom gene
JOURNAL Plasmid 38 (3), 210-219 (1997)
PUBMED 9435023
REFERENCE 2 (bases 1 to 2495)
AUTHORS Mikiewicz,D., Wrobel,B., Wegrzyn,G. and Plucienniczak,A.
TITLE Direct Submission
JOURNAL Submitted (19-JUL-1997) Bioengineering, Institute of Biotechnology
and Antibiotics, Staroscinska 5, Warsaw 02-516, Poland
FEATURES Location/Qualifiers
source 1..2495
/organism="Pantoea agglomerans"
/mol_type="genomic DNA"
/db_xref="taxon:549"
/plasmid="ColE1-like plasmid"
misc_feature 134..961
/inference="non-experimental evidence, no additional
details recorded"
/note="similar to regulatory parts of ColE1-like plasmids"
regulatory 144..149
/regulatory_class="minus_35_signal"
/note="RNA II; by analogy to ColE1-like replicons"
regulatory 167..172
/regulatory_class="minus_10_signal"
/note="RNA II; by analogy to ColE1-like replicons"
misc_feature 181
/inference="non-experimental evidence, no additional
details recorded"
/note="RNA II transcription start; by analogy to
ColE1-like replicons"
misc_feature 286
/inference="non-experimental evidence, no additional
details recorded"
/note="RNA I transcription start"
regulatory complement(294..299)
/regulatory_class="minus_10_signal"
/note="RNA I; by analogy to ColE1-like replicons"
regulatory complement(318..323)
/regulatory_class="minus_35_signal"
/inference="non-experimental evidence, no additional
details recorded"
/note="RNA I; by analogy to ColE1-like replicons"
rep_origin 698
/note="OriV; by analogy with ColE1-like replicons"
gene complement(1619..1804)
/gene="rom"
CDS complement(1619..1804)
/gene="rom"
/function="regulates copy number of plasmid"
/codon_start=1
/transl_table=11
/product="RNA one modulator"
/protein_id="AAB97963.1"
/translation="MTRQESAALNMAKFIRAQTLLLLERLEQMDLDEAAGCCEHLHDQ
AEALYAMLNAQIGEENA"
BASE COUNT 509 a 611 c 673 g 702 t
ORIGIN
1 gttaggcgcg aggtgctatg gtcaaagtgt ggtgtcaggc ggggaggagg cttatatgag
61 atgtaatccg gccgatacat ataccaagat gatttaagta ttcctctttg tgaggttgga
121 tgtctaattt ataaaggatc ttcttgagat cctttttttc cgcgcgtaat ctcttgccct
181 gtaaacgaaa aaaccaccct ggcaggtggt ttttcgaagg ttaggtaatc ctggcagatc
241 ccctaaccgt ggtaacagtc ttgtgcgaga catgtcacca aatttgtcct ttcagtgtag
301 cctcactaag gccgccactt caagaactct tgagacatct ctcgcacatc ctgtttgcca
361 atggccgttg ccaatggcga ttagtcgtgt ctttccgggt tggactcaag ttgatagtta
421 ccggataagg cgcagcggtc ggactgaacg gggggttcgt gcatacagtc catcctggag
481 cgaactgcct tcccggaact gagtgtcagg cgtggaatga gaaaccgcgg ccataacagc
541 ggagtgacac cggtaaaccg aaaggcagga atgcggggga gcacgaggga gccaccaggg
601 ggaaacgcct ggtatcttta agccgcatcg ggtttcgcca ccactgattt gagcgtcaga
661 ttctgtgatg cttgtcaggg gggcggagcc tatggaaaaa cggctttggc gcggccttat
721 gctttcttcg ttaagtatct tcctggcatc ccccaggaaa tttctgatcc atccgtaagc
781 ccgtcccgct cgccgcagcc gaacgaccga gcggagcgag tcagtgagcg aggaagcgga
841 atatattctg tatcacattt tctcctgacg cgttttcttt cactttctgc gcctgtctta
901 tgtggcatta atgctatgtg ttactgccat gctacatctt aagccagtat acactccgct
961 agtgctccgt gactggtccg gcgctgcgcc cggaacccgc ctgtaccggt tcagcagccg
1021 ttccggcctg actgcaattt tttttttttc atccctgccc gctaccctgt aaacctttct
1081 tctgcgttgc cgttaacagt aggtaagcca tgtttggttt ttcttccgga gccctgatga
1141 ctcttagtga tgatgagcga cacctgcttg tgtccgttgt ttcggtctgg ctacggcgtg
1201 ccggagggga tgccggagcc atgatgctgg atgcataccg gcagattttg tctgaaaccg
1261 aaccggccgt aaggactgtc atgctcgaat ttcttgaatc cgttcgcatt cattacattt
1321 cgtcctgagc attttctgta tttctgtcca tacttaaacg aggcggccgt cacggacggt
1381 ggtcgtcgtt ccatgatgct gttatggacg agtgagagta atctaatcta acttgattga
1441 gttccgggcg tgccgcccgg ttttttttgc tgtttcccgg tgtccgttcc gggacaggat
1501 gtgcatttgt aataccgcgc acgcgccggc atcacaaata ccctggtcag ggctgcgccc
1561 cgacaccccg ccatcgcctc acggccgcgc actgaattgc gcacccgttc accgattttc
1621 acgcattttc ctcgcctatc tgtgcgttca gcatggcgta aagcgcttcg gcctgatcgt
1681 gcaggtgctc acagcagccg gcagcctcat ccagatccat ctgctcgagc cgctcaagga
1741 ggagaagtgt ctgtgcgcgg ataaatttgg ccatattgag ggcggcggat tcctgtctgg
1801 tcactggtga ttttccccgt ctggtgatga tttttgcgtg aaaagagcat ggcgtcattc
1861 tggtgcatag tcatgcatgc cgttaaaatt taacaggcgc gtttctgacg ggttccgggg
1921 tggtttgttg tggtttttgt catggtttcg tcaggaaccc gctgaacgcg tctcaggcgg
1981 tgcgggcaac ggatgttatg gtaaattctt gggggcttga ttataaaata ccgcacttcc
2041 tcttatgtct tgtgcttttt agacaaccct gaaagctttt agctttggtg atgcaatttg
2101 ctgggatttt ggcggagaac cacaggtaaa gaaaaaggcc acattagcgg cctttttcgg
2161 agaagatgct cagtgcggaa tttcggagac ttctttaacg tcggttttat tgatctgctg
2221 tttgacacca ttcgcgtctg tatagccaag caggcctgag tctgattctt taggtttgcc
2281 gtcgctgaca atagtgcgac cgtcattggt gtgtatggca tagcttgtgc gcgtgcagcc
2341 ggtgagggct gaaagcgcaa ctgccgctgc gaacactgaa acaaaaatct ttttcaaagc
2401 cagctccttt tatccatatc agttttggtc actaaccatc taactatagg tcatttttta
2461 tgtgaaaaga ggcttgatgg tgggctgtat atcga
//