LOCUS AB039593 804 bp DNA linear BCT 09-JAN-2009
DEFINITION Pseudomonas asplenii rpoD gene for DNA-directed RNA polymerase
subunit D, partial cds, strain: NCPPB 1947.
ACCESSION AB039593
VERSION AB039593.1
KEYWORDS .
SOURCE Pseudomonas asplenii
ORGANISM Pseudomonas asplenii
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
Pseudomonadaceae; Pseudomonas.
REFERENCE 1 (bases 1 to 804)
AUTHORS Yamamoto,S.
TITLE Direct Submission
JOURNAL Submitted (02-MAR-2000) to the DDBJ/EMBL/GenBank databases.
Contact:Satoshi Yamamoto
Marine Biotechnology Institute, Microbial Diversity Group; 3-75-1,
Heita, Kamaishi, Iwate 026-0001, Japan
URL :http://www.mbio.co.jp/
REFERENCE 2
AUTHORS Yamamoto,S., Kasai,H., Arnold,D.L., Jackson,R.W., Vivian,A. and
Harayama,S.
TITLE Phylogeny of the genus Pseudomonas: intrageneric structure
reconstructed from the nucleotide sequences of gyrB and rpoD genes
JOURNAL Microbiology 146, 2385-2394 (2000)
COMMENT
FEATURES Location/Qualifiers
source 1..804
/clone="RD10177.icb"
/db_xref="taxon:53407"
/mol_type="genomic DNA"
/organism="Pseudomonas asplenii"
/strain="NCPPB 1947"
CDS <1..>804
/codon_start=1
/EC_number="2.7.7.6"
/gene="rpoD"
/product="DNA-directed RNA polymerase subunit D"
/protein_id="BAB17563.1"
/transl_table=11
/translation="VELLTREGEIEIAKRIEEGIREVMGAIAHFPGTVDYILDEYNRV
TSEGGRLSDVLSGYIDPDDGIALPAAEVPPPVDAKTGKENATDDEDEESDSDDEDEVE
SGPDPIVAAQRFGAVADQLEIARKALKKHGRGNKATIAELLLLAELFMPIKLVPKQFE
VLVERVRSALERLRQQERAIMQLCVRDARMPRADFLRQFPGNEIDESWTDALAKGKSK
YAEAIGRLQPDIIRCQQKLTALEAETGLTIAEIKDINRRMSIGEAKARRA"
BASE COUNT 183 a 253 c 243 g 125 t
ORIGIN
1 gtagagctgc tcacacgtga aggcgaaatt gaaatcgcca agcgtatcga agagggcatc
61 cgtgaagtga tgggcgcaat cgcgcacttc cctggcacgg ttgactacat cctcgacgaa
121 tacaatcgcg tcaccagcga aggtggccgt ctgtccgacg ttctcagcgg ttacatcgat
181 ccggacgacg gcatcgcgct gcctgccgcc gaagtaccgc caccggtcga tgccaagacc
241 ggcaaggaaa acgccaccga tgacgaggac gaagagtccg acagcgacga cgaggacgag
301 gtcgaaagcg gcccggaccc tatcgttgcc gcacagcgtt tcggtgccgt cgccgatcag
361 ctggaaatcg ctcgcaaggc gctgaaaaag cacggtcgcg gcaacaaggc gaccatcgcc
421 gagctgctgc tcctggccga gctgttcatg ccgatcaagc tggttcccaa gcagttcgaa
481 gtcctggtcg agcgtgttcg cagtgctctg gagcgtctgc gtcagcaaga acgcgccatc
541 atgcaactgt gcgtgcgtga tgcccgcatg ccgcgtgccg atttcctgcg ccagttccca
601 ggcaacgaaa tcgacgaaag ctggaccgac gccctggcca aaggcaagag caaatacgcc
661 gaagccatcg gccgtctgca gccggacatc atccgttgcc agcagaagct gaccgcactc
721 gaggccgaaa ccggcctgac gattgccgag atcaaggaca tcaaccgtcg catgtcgatc
781 ggtgaggcca aggcccgccg cgcg
//