LOCUS       AB039587                 807 bp    DNA     linear   BCT 09-JAN-2009
DEFINITION  Pseudomonas putida rpoD gene for DNA-directed RNA polymerase
            subunit D, partial cds, strain: IFO 14164.
ACCESSION   AB039587
VERSION     AB039587.1
KEYWORDS    .
SOURCE      Pseudomonas putida
  ORGANISM  Pseudomonas putida
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
            Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 807)
  AUTHORS   Yamamoto,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-MAR-2000) to the DDBJ/EMBL/GenBank databases.
            Contact:Satoshi Yamamoto
            Marine Biotechnology Institute, Microbial Diversity Group; 3-75-1,
            Heita, Kamaishi, Iwate 026-0001, Japan
            URL    :http://www.mbio.co.jp/
REFERENCE   2
  AUTHORS   Yamamoto,S., Kasai,H., Arnold,D.L., Jackson,R.W., Vivian,A. and
            Harayama,S.
  TITLE     Phylogeny of the genus Pseudomonas: intrageneric structure
            reconstructed from the nucleotide sequences of gyrB and rpoD genes
  JOURNAL   Microbiology 146, 2385-2394 (2000)
COMMENT     
FEATURES             Location/Qualifiers
     source          1..807
                     /clone="RD10171.icb"
                     /db_xref="taxon:303"
                     /mol_type="genomic DNA"
                     /organism="Pseudomonas putida"
                     /strain="IFO 14164"
     CDS             <1..>807
                     /codon_start=1
                     /EC_number="2.7.7.6"
                     /gene="rpoD"
                     /product="DNA-directed RNA polymerase subunit D"
                     /protein_id="BAB17557.1"
                     /transl_table=11
                     /translation="VELLTREGEIEIAKRIEEGIREVMGAIAHFPGTVDYILGEYDRV
                     TTEGGRLSDVLSGYIDPDDNIAAPTEEVPIPGAKAAAAKEESDDEEEEAESSDDEEET
                     ESGPDPVVAAQRFGAVSDQLQATFKVVKKHGRAHKESIAALQALADLFMPIKLVPKQF
                     EVLVERVRDSLNRLRQQERAIMQLCVRDARMPRADFLRMFPSNETDQTWSGDLAKRNT
                     KWAAALGEKDAAIVACQQKLIDLETETGLTVAEIKDINRRMSIGEAKARRA"
BASE COUNT          182 a          251 c          248 g          126 t
ORIGIN      
        1 gtcgagcttc tgacccgcga aggcgagatc gaaatcgcca agcgtatcga ggaaggcatc
       61 cgtgaagtca tgggcgccat cgctcacttc ccgggcactg tcgattacat tctcggcgaa
      121 tatgaccgcg tcaccaccga gggcggacga ctgtcggacg tgctcagcgg ttacatcgac
      181 cctgacgaca acatcgccgc gccgaccgaa gaggtgccga tccctggcgc caaggccgca
      241 gctgcgaagg aagagtctga cgacgaagag gaagaagccg agagcagtga cgacgaggaa
      301 gagaccgaga gcggtccgga cccggtagtc gcagcccaac gtttcggtgc ggtatccgac
      361 cagcttcaag cgaccttcaa ggtcgtgaag aagcacggtc gtgcccacaa ggaaagcatc
      421 gcggccctgc aagccctcgc cgacctgttc atgccgatca agctggtacc caagcagttc
      481 gaggtcctgg tagagcgtgt tcgtgattcc ctgaaccgtc tgcgtcagca agagcgcgcc
      541 atcatgcagc tgtgcgtgcg tgatgcccgc atgccgcgtg ccgacttcct gcgcatgttc
      601 ccgagcaacg aaaccgacca gacctggagc ggtgacctgg ccaagcgcaa caccaaatgg
      661 gctgctgccc tgggtgaaaa ggacgccgcc atcgtcgctt gccagcagaa gctgatcgac
      721 cttgagaccg aaaccggcct gaccgttgcc gagatcaagg acatcaaccg tcgcatgtcg
      781 atcggtgaag cgaaggcccg tcgcgcc
//