LOCUS AB039587 807 bp DNA linear BCT 09-JAN-2009 DEFINITION Pseudomonas putida rpoD gene for DNA-directed RNA polymerase subunit D, partial cds, strain: IFO 14164. ACCESSION AB039587 VERSION AB039587.1 KEYWORDS . SOURCE Pseudomonas putida ORGANISM Pseudomonas putida Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas. REFERENCE 1 (bases 1 to 807) AUTHORS Yamamoto,S. TITLE Direct Submission JOURNAL Submitted (02-MAR-2000) to the DDBJ/EMBL/GenBank databases. Contact:Satoshi Yamamoto Marine Biotechnology Institute, Microbial Diversity Group; 3-75-1, Heita, Kamaishi, Iwate 026-0001, Japan URL :http://www.mbio.co.jp/ REFERENCE 2 AUTHORS Yamamoto,S., Kasai,H., Arnold,D.L., Jackson,R.W., Vivian,A. and Harayama,S. TITLE Phylogeny of the genus Pseudomonas: intrageneric structure reconstructed from the nucleotide sequences of gyrB and rpoD genes JOURNAL Microbiology 146, 2385-2394 (2000) COMMENT FEATURES Location/Qualifiers source 1..807 /clone="RD10171.icb" /db_xref="taxon:303" /mol_type="genomic DNA" /organism="Pseudomonas putida" /strain="IFO 14164" CDS <1..>807 /codon_start=1 /EC_number="2.7.7.6" /gene="rpoD" /product="DNA-directed RNA polymerase subunit D" /protein_id="BAB17557.1" /transl_table=11 /translation="VELLTREGEIEIAKRIEEGIREVMGAIAHFPGTVDYILGEYDRV TTEGGRLSDVLSGYIDPDDNIAAPTEEVPIPGAKAAAAKEESDDEEEEAESSDDEEET ESGPDPVVAAQRFGAVSDQLQATFKVVKKHGRAHKESIAALQALADLFMPIKLVPKQF EVLVERVRDSLNRLRQQERAIMQLCVRDARMPRADFLRMFPSNETDQTWSGDLAKRNT KWAAALGEKDAAIVACQQKLIDLETETGLTVAEIKDINRRMSIGEAKARRA" BASE COUNT 182 a 251 c 248 g 126 t ORIGIN 1 gtcgagcttc tgacccgcga aggcgagatc gaaatcgcca agcgtatcga ggaaggcatc 61 cgtgaagtca tgggcgccat cgctcacttc ccgggcactg tcgattacat tctcggcgaa 121 tatgaccgcg tcaccaccga gggcggacga ctgtcggacg tgctcagcgg ttacatcgac 181 cctgacgaca acatcgccgc gccgaccgaa gaggtgccga tccctggcgc caaggccgca 241 gctgcgaagg aagagtctga cgacgaagag gaagaagccg agagcagtga cgacgaggaa 301 gagaccgaga gcggtccgga cccggtagtc gcagcccaac gtttcggtgc ggtatccgac 361 cagcttcaag cgaccttcaa ggtcgtgaag aagcacggtc gtgcccacaa ggaaagcatc 421 gcggccctgc aagccctcgc cgacctgttc atgccgatca agctggtacc caagcagttc 481 gaggtcctgg tagagcgtgt tcgtgattcc ctgaaccgtc tgcgtcagca agagcgcgcc 541 atcatgcagc tgtgcgtgcg tgatgcccgc atgccgcgtg ccgacttcct gcgcatgttc 601 ccgagcaacg aaaccgacca gacctggagc ggtgacctgg ccaagcgcaa caccaaatgg 661 gctgctgccc tgggtgaaaa ggacgccgcc atcgtcgctt gccagcagaa gctgatcgac 721 cttgagaccg aaaccggcct gaccgttgcc gagatcaagg acatcaaccg tcgcatgtcg 781 atcggtgaag cgaaggcccg tcgcgcc //