LOCUS AB039563 804 bp DNA linear BCT 09-JAN-2009 DEFINITION Pseudomonas agarici rpoD gene for DNA-directed RNA polymerase subunit D, partial cds, strain: NCPPB 2289. ACCESSION AB039563 VERSION AB039563.1 KEYWORDS . SOURCE Pseudomonas agarici ORGANISM Pseudomonas agarici Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas. REFERENCE 1 (bases 1 to 804) AUTHORS Yamamoto,S. TITLE Direct Submission JOURNAL Submitted (02-MAR-2000) to the DDBJ/EMBL/GenBank databases. Contact:Satoshi Yamamoto Marine Biotechnology Institute, Microbial Diversity Group; 3-75-1, Heita, Kamaishi, Iwate 026-0001, Japan URL :http://www.mbio.co.jp/ REFERENCE 2 AUTHORS Yamamoto,S., Kasai,H., Arnold,D.L., Jackson,R.W., Vivian,A. and Harayama,S. TITLE Phylogeny of the genus Pseudomonas: intrageneric structure reconstructed from the nucleotide sequences of gyrB and rpoD genes JOURNAL Microbiology 146, 2385-2394 (2000) COMMENT FEATURES Location/Qualifiers source 1..804 /clone="RD10147.icb" /db_xref="taxon:46677" /mol_type="genomic DNA" /organism="Pseudomonas agarici" /strain="NCPPB 2289" CDS <1..>804 /codon_start=1 /EC_number="2.7.7.6" /gene="rpoD" /product="DNA-directed RNA polymerase subunit D" /protein_id="BAB17533.1" /transl_table=11 /translation="VELLTREGEIEIAKRIEEGIREVMGAIAHFPGTVEHILGEYTRV TTESGRLSDVLSGYIDPDDGIAPPAAEVPPPIDAKAAKADDDSDDDEAEASDDEEEAE SGPDPIIAAQRFGAVADQLEITTKALKKHGRHNKAAIAELLALAELFMPIKLVPKQFE ALVERVRGALDRLRQQERAIMQLCVRDARMPRADFLRQFPGNEIDESWTAALAKGKSK YAEAIGRLQPDIVRCQQKLSALEAETGLTIAEIKDINRRMSIGEAKARRA" BASE COUNT 182 a 255 c 243 g 124 t ORIGIN 1 gtggagctgc tcacgcgtga aggcgaaatc gaaatcgcca agcgtatcga agagggcatt 61 cgtgaagtga tgggcgcaat cgcgcacttc cctggcacgg ttgaacacat cctcggcgaa 121 tacacccgcg tcaccaccga gagtggtcgc ctgtccgacg tcctcagcgg ttatatcgac 181 ccggacgacg gcattgcgcc gcctgccgcc gaagttccgc cgcccatcga tgccaaggct 241 gccaaagcag acgatgacag tgacgacgat gaagccgagg ccagcgacga cgaagaagaa 301 gccgaaagcg gtcctgatcc aatcatcgcc gcccagcgct ttggcgccgt ggccgaccag 361 ttggagatca ccaccaaggc gctgaaaaag cacggtcgcc acaacaaggc ggccatcgcc 421 gaactgttgg ccctggccga gctgttcatg ccgatcaaac tggtaccgaa gcaattcgaa 481 gccctggtcg agcgtgttcg cggtgccctg gatcgcctgc gtcagcaaga acgcgccatc 541 atgcagctgt gcgtgcgtga tgcccggatg ccacgtgccg acttcctgcg ccagttccca 601 ggcaacgaaa tcgacgaaag ctggactgct gctctggcca agggtaagag caaatatgcc 661 gaagccatcg gccgcttgca gccggacatc gtccgttgcc agcagaagct gagcgcgctc 721 gaagccgaaa ccggcctgac gattgccgag atcaaggaca tcaaccgtcg catgtcgatc 781 ggcgaggcca aggcccgtcg cgcg //