LOCUS       AB039563                 804 bp    DNA     linear   BCT 09-JAN-2009
DEFINITION  Pseudomonas agarici rpoD gene for DNA-directed RNA polymerase
            subunit D, partial cds, strain: NCPPB 2289.
ACCESSION   AB039563
VERSION     AB039563.1
KEYWORDS    .
SOURCE      Pseudomonas agarici
  ORGANISM  Pseudomonas agarici
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
            Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 804)
  AUTHORS   Yamamoto,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-MAR-2000) to the DDBJ/EMBL/GenBank databases.
            Contact:Satoshi Yamamoto
            Marine Biotechnology Institute, Microbial Diversity Group; 3-75-1,
            Heita, Kamaishi, Iwate 026-0001, Japan
            URL    :http://www.mbio.co.jp/
REFERENCE   2
  AUTHORS   Yamamoto,S., Kasai,H., Arnold,D.L., Jackson,R.W., Vivian,A. and
            Harayama,S.
  TITLE     Phylogeny of the genus Pseudomonas: intrageneric structure
            reconstructed from the nucleotide sequences of gyrB and rpoD genes
  JOURNAL   Microbiology 146, 2385-2394 (2000)
COMMENT     
FEATURES             Location/Qualifiers
     source          1..804
                     /clone="RD10147.icb"
                     /db_xref="taxon:46677"
                     /mol_type="genomic DNA"
                     /organism="Pseudomonas agarici"
                     /strain="NCPPB 2289"
     CDS             <1..>804
                     /codon_start=1
                     /EC_number="2.7.7.6"
                     /gene="rpoD"
                     /product="DNA-directed RNA polymerase subunit D"
                     /protein_id="BAB17533.1"
                     /transl_table=11
                     /translation="VELLTREGEIEIAKRIEEGIREVMGAIAHFPGTVEHILGEYTRV
                     TTESGRLSDVLSGYIDPDDGIAPPAAEVPPPIDAKAAKADDDSDDDEAEASDDEEEAE
                     SGPDPIIAAQRFGAVADQLEITTKALKKHGRHNKAAIAELLALAELFMPIKLVPKQFE
                     ALVERVRGALDRLRQQERAIMQLCVRDARMPRADFLRQFPGNEIDESWTAALAKGKSK
                     YAEAIGRLQPDIVRCQQKLSALEAETGLTIAEIKDINRRMSIGEAKARRA"
BASE COUNT          182 a          255 c          243 g          124 t
ORIGIN      
        1 gtggagctgc tcacgcgtga aggcgaaatc gaaatcgcca agcgtatcga agagggcatt
       61 cgtgaagtga tgggcgcaat cgcgcacttc cctggcacgg ttgaacacat cctcggcgaa
      121 tacacccgcg tcaccaccga gagtggtcgc ctgtccgacg tcctcagcgg ttatatcgac
      181 ccggacgacg gcattgcgcc gcctgccgcc gaagttccgc cgcccatcga tgccaaggct
      241 gccaaagcag acgatgacag tgacgacgat gaagccgagg ccagcgacga cgaagaagaa
      301 gccgaaagcg gtcctgatcc aatcatcgcc gcccagcgct ttggcgccgt ggccgaccag
      361 ttggagatca ccaccaaggc gctgaaaaag cacggtcgcc acaacaaggc ggccatcgcc
      421 gaactgttgg ccctggccga gctgttcatg ccgatcaaac tggtaccgaa gcaattcgaa
      481 gccctggtcg agcgtgttcg cggtgccctg gatcgcctgc gtcagcaaga acgcgccatc
      541 atgcagctgt gcgtgcgtga tgcccggatg ccacgtgccg acttcctgcg ccagttccca
      601 ggcaacgaaa tcgacgaaag ctggactgct gctctggcca agggtaagag caaatatgcc
      661 gaagccatcg gccgcttgca gccggacatc gtccgttgcc agcagaagct gagcgcgctc
      721 gaagccgaaa ccggcctgac gattgccgag atcaaggaca tcaaccgtcg catgtcgatc
      781 ggcgaggcca aggcccgtcg cgcg
//