LOCUS       AB039507                 807 bp    DNA     linear   BCT 09-JAN-2009
DEFINITION  Pseudomonas caricapapayae rpoD gene for DNA-directed RNA
            polymerase subunit D, partial cds, strain: NCPPB 1873.
ACCESSION   AB039507
VERSION     AB039507.1
KEYWORDS    .
SOURCE      Pseudomonas caricapapayae
  ORGANISM  Pseudomonas caricapapayae
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
            Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 807)
  AUTHORS   Yamamoto,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-MAR-2000) to the DDBJ/EMBL/GenBank databases.
            Contact:Satoshi Yamamoto
            Marine Biotechnology Institute, Microbial Diversity Group; 3-75-1,
            Heita, Kamaishi, Iwate 026-0001, Japan
            URL    :http://www.mbio.co.jp/
REFERENCE   2
  AUTHORS   Yamamoto,S., Kasai,H., Arnold,D.L., Jackson,R.W., Vivian,A. and
            Harayama,S.
  TITLE     Phylogeny of the genus Pseudomonas: intrageneric structure
            reconstructed from the nucleotide sequences of gyrB and rpoD genes
  JOURNAL   Microbiology 146, 2385-2394 (2000)
COMMENT     
FEATURES             Location/Qualifiers
     source          1..807
                     /clone="RD10091.icb"
                     /db_xref="taxon:46678"
                     /mol_type="genomic DNA"
                     /organism="Pseudomonas caricapapayae"
                     /strain="NCPPB 1873"
     CDS             <1..>807
                     /codon_start=1
                     /EC_number="2.7.7.6"
                     /gene="rpoD"
                     /product="DNA-directed RNA polymerase subunit D"
                     /protein_id="BAB17477.1"
                     /transl_table=11
                     /translation="VELLTREGEIEIAKRIEEGIREVMGAIAHFPGTVDHILSEYTRV
                     TSEGGRLSDVLSGYIDPDDGIAPPAEVPPPVDPKAVKAEGADDDEEESADGSDDEDEV
                     ESGPDPVIAQQRFGAVSDQMEITRKALKKFGRDDKHAIAEMVALAELFMPIKLVPKQF
                     EGLVERVRGALERLRAQERAIMQLCVRDARMPRADFLRQFPGNEVDESWTDALAKGKG
                     KYAEAIGRLQPDIQRCQQKLSALEEETGLKIAEIKDINRRMSIGEAKARRA"
BASE COUNT          195 a          233 c          238 g          141 t
ORIGIN      
        1 gttgaacttc tgacccgtga aggcgaaatc gaaatcgcca aacgtatcga agaaggcatc
       61 cgtgaagtga tgggcgcaat tgcgcacttc ccaggcacgg ttgaccatat tctttccgaa
      121 tacacgcgag tcaccagtga aggcggtcgc ctgtccgatg ttctgagcgg ctatatcgac
      181 ccggacgacg gcatcgcgcc gcctgccgaa gtgcctccgc ctgtagaccc caaagccgtc
      241 aaggccgaag gtgccgatga cgacgaagaa gaatcggcag acggaagcga cgacgaagac
      301 gaagtcgaaa gcggtcccga tccggtcatc gcccagcagc gcttcggtgc ggtttccgat
      361 caaatggaaa tcacccgcaa ggcgctgaag aaattcggtc gcgacgacaa gcacgccatt
      421 gccgaaatgg ttgcacttgc tgaactcttc atgccgatca aactggttcc aaagcagttt
      481 gaaggtctgg tagagcgtgt ccgcggtgct ctcgagcgtc tgcgtgctca ggaacgcgcc
      541 atcatgcagc tgtgtgtacg tgatgcacgt atgccgcgcg ccgacttcct tcgccagttc
      601 ccgggcaacg aagtcgacga aagctggact gacgcactgg ccaagggcaa gggcaaatac
      661 gccgaagcca ttggtcgtct gcagcctgac atccagcgtt gccagcaaaa gctgtctgca
      721 ctggaagaag agaccggcct gaaaatagcc gagatcaagg acatcaaccg tcgcatgtcg
      781 atcggtgagg ccaaggcccg ccgcgcg
//