LOCUS AB039507 807 bp DNA linear BCT 09-JAN-2009 DEFINITION Pseudomonas caricapapayae rpoD gene for DNA-directed RNA polymerase subunit D, partial cds, strain: NCPPB 1873. ACCESSION AB039507 VERSION AB039507.1 KEYWORDS . SOURCE Pseudomonas caricapapayae ORGANISM Pseudomonas caricapapayae Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas. REFERENCE 1 (bases 1 to 807) AUTHORS Yamamoto,S. TITLE Direct Submission JOURNAL Submitted (02-MAR-2000) to the DDBJ/EMBL/GenBank databases. Contact:Satoshi Yamamoto Marine Biotechnology Institute, Microbial Diversity Group; 3-75-1, Heita, Kamaishi, Iwate 026-0001, Japan URL :http://www.mbio.co.jp/ REFERENCE 2 AUTHORS Yamamoto,S., Kasai,H., Arnold,D.L., Jackson,R.W., Vivian,A. and Harayama,S. TITLE Phylogeny of the genus Pseudomonas: intrageneric structure reconstructed from the nucleotide sequences of gyrB and rpoD genes JOURNAL Microbiology 146, 2385-2394 (2000) COMMENT FEATURES Location/Qualifiers source 1..807 /clone="RD10091.icb" /db_xref="taxon:46678" /mol_type="genomic DNA" /organism="Pseudomonas caricapapayae" /strain="NCPPB 1873" CDS <1..>807 /codon_start=1 /EC_number="2.7.7.6" /gene="rpoD" /product="DNA-directed RNA polymerase subunit D" /protein_id="BAB17477.1" /transl_table=11 /translation="VELLTREGEIEIAKRIEEGIREVMGAIAHFPGTVDHILSEYTRV TSEGGRLSDVLSGYIDPDDGIAPPAEVPPPVDPKAVKAEGADDDEEESADGSDDEDEV ESGPDPVIAQQRFGAVSDQMEITRKALKKFGRDDKHAIAEMVALAELFMPIKLVPKQF EGLVERVRGALERLRAQERAIMQLCVRDARMPRADFLRQFPGNEVDESWTDALAKGKG KYAEAIGRLQPDIQRCQQKLSALEEETGLKIAEIKDINRRMSIGEAKARRA" BASE COUNT 195 a 233 c 238 g 141 t ORIGIN 1 gttgaacttc tgacccgtga aggcgaaatc gaaatcgcca aacgtatcga agaaggcatc 61 cgtgaagtga tgggcgcaat tgcgcacttc ccaggcacgg ttgaccatat tctttccgaa 121 tacacgcgag tcaccagtga aggcggtcgc ctgtccgatg ttctgagcgg ctatatcgac 181 ccggacgacg gcatcgcgcc gcctgccgaa gtgcctccgc ctgtagaccc caaagccgtc 241 aaggccgaag gtgccgatga cgacgaagaa gaatcggcag acggaagcga cgacgaagac 301 gaagtcgaaa gcggtcccga tccggtcatc gcccagcagc gcttcggtgc ggtttccgat 361 caaatggaaa tcacccgcaa ggcgctgaag aaattcggtc gcgacgacaa gcacgccatt 421 gccgaaatgg ttgcacttgc tgaactcttc atgccgatca aactggttcc aaagcagttt 481 gaaggtctgg tagagcgtgt ccgcggtgct ctcgagcgtc tgcgtgctca ggaacgcgcc 541 atcatgcagc tgtgtgtacg tgatgcacgt atgccgcgcg ccgacttcct tcgccagttc 601 ccgggcaacg aagtcgacga aagctggact gacgcactgg ccaagggcaa gggcaaatac 661 gccgaagcca ttggtcgtct gcagcctgac atccagcgtt gccagcaaaa gctgtctgca 721 ctggaagaag agaccggcct gaaaatagcc gagatcaagg acatcaaccg tcgcatgtcg 781 atcggtgagg ccaaggcccg ccgcgcg //