LOCUS AB015615 2288 bp mRNA linear PLN 06-JUL-2001
DEFINITION Oryza sativa mRNA for isoamylase, partial cds.
ACCESSION AB015615
VERSION AB015615.1
KEYWORDS .
SOURCE Oryza sativa (Asian cultivated rice)
ORGANISM Oryza sativa
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
clade; Oryzoideae; Oryzeae; Oryzinae; Oryza.
REFERENCE 1 (bases 1 to 2288)
AUTHORS Nakamura,Y.
TITLE Direct Submission
JOURNAL Submitted (17-JUN-1998) to the DDBJ/EMBL/GenBank databases.
Contact:Yasunori Nakamura
National Institute of Agrobiological Resources, Department of
Plant Physiology; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE 2
AUTHORS Fujita,N., Kubo,A., Francisco,P.B., Nakakita,M., Harada,K.,
Minaka,N. and Nakamura,Y.
TITLE Purification, characterization, and cDNA structure of isoamylase
from developing endosperm of rice
JOURNAL Planta 208, 283-293 (1999)
COMMENT
FEATURES Location/Qualifiers
source 1..2288
/chromosome="8"
/clone_lib="lambda gt11"
/cultivar="Fujihikari"
/db_xref="taxon:4530"
/dev_stage="early- to mid-milking stage"
/map="determined"
/mol_type="mRNA"
/organism="Oryza sativa"
/tissue_lib="endosperm"
/tissue_type="endosperm"
CDS <1..2202
/codon_start=1
/product="isoamylase"
/protein_id="BAA29041.1"
/transl_table=1
/translation="VEAVVMPERYALGGACRVLAGMPAPLGATALDGGVNFAVYSAGA
SAASLCLFTPDDLEADEVTEEVPLDPLFNRTGNVWHVFIEGELHNMLYGYRFDGMFAP
HCGQYFDVSNVVVDPYAKAVISRGEYGVPGPGGDCWPQMAGMIPLPYSTFDWQGDLPL
RYPQKDLVIYEMHLRGFTKHSSSNVEHPGTYIGAISKLDYLKELGVNCVELMPCHEFN
ELEYFSCSSKMNFWGYSTINFFSPMIRYSSGGIRNCGRDAINEFKTFVREAHKRGIEV
IMDVVFNHTAEGNEKGPILSFRGIDNSTYYMLAPKGEFYNYSGCGNTFNCNHPVVREF
IVDCLRYWVTEMHVDGFRFDLASIMTRGCSLWDPVNVYGSPVEGDMTTTGTPLATPPL
IDMISNDPILGDVKLIAEAWDAGGLYQVGQFPHWKIWSEWNGKYRDIVRQFIKGTDGF
AGGFAECLCGSPHLYQAGGRKPWHSINFVCAHDGFTLADLVTYNKKYNSSNGEDNRDG
ENHNLSWNCGEEGEFAGLSVKRLRKRQMRNFFVSLMVSQGVPMFYMGDEYGHTKGGNN
NTYCHDHYVNYFRWDKKEESSDLQRFCSLMTKFRKQCESLGLADFPTAQRLHWHGHQP
GKPDWSETSRFVAFSTKDETKGEIYVAFNASHLPAVVGLPERPGYRWEPLVDTGKPAP
YDFLTDDLPDRVTPSTCSLISSTPISTPCSATPPSSLNCSLMIERTKYSIV"
BASE COUNT 587 a 508 c 593 g 600 t
ORIGIN
1 gtggaggcgg tggtgatgcc ggagaggtac gcgctgggtg gcgcgtgcag ggtgctcgcc
61 ggaatgcccg cgccgctcgg ggccaccgcg ctcgacggcg gggtcaattt cgccgtctac
121 tccgccggcg catccgccgc gtcgctctgc ctcttcaccc ccgacgatct cgaggcggat
181 gaggtgactg aggaggttcc gcttgatcct ctgttcaatc ggacggggaa tgtgtggcac
241 gtcttcatcg aaggcgagct gcacaacatg ctgtacgggt acaggttcga tggtatgttc
301 gcccctcact gcggccagta cttcgatgtc tccaatgtcg tggtggatcc ttatgccaag
361 gcagtgataa gccgaggaga gtatggtgtc cccggtcctg gtggcgattg ctggcctcaa
421 atggctggca tgatccctct tccgtacagt acgtttgatt ggcaaggtga cctacctctg
481 agatatcctc agaaggatct tgtaatctat gagatgcatt tacgtgggtt tacaaagcac
541 agttcaagca atgtagaaca tccagggact tacattgggg ctatatcaaa gcttgactat
601 ctgaaggagc ttggagttaa ctgtgtagag ttgatgccct gccatgaatt caatgagctg
661 gagtacttca gctgctcttc caagatgaac ttctggggat actccacgat aaactttttt
721 tcaccaatga taagatattc atcaggtggg ataagaaact gtggccgtga tgccataaat
781 gaattcaaaa cttttgttag agaggctcac aaacggggaa ttgaggtgat catggatgtt
841 gtcttcaatc atacagccga gggtaatgag aaaggaccaa tattatcatt tagggggata
901 gataatagca catactatat gcttgcccct aagggagagt tttacaatta ttctggttgt
961 gggaatacct tcaactgtaa tcatcctgtg gtccgtgaat ttattgtaga ttgtttaaga
1021 tactgggtga cagaaatgca tgttgatggt tttcgttttg atcttgcatc cataatgacc
1081 agaggatgca gtctttggga tccagttaat gtgtatggaa gtccagtaga aggtgacatg
1141 actacgacag ggacacctct tgctactcca ccacttattg acatgatcag caatgatcca
1201 attcttggag atgtcaagct cattgctgaa gcatgggatg cgggaggcct ctatcaagta
1261 ggtcaatttc ctcactggaa aatttggtca gaatggaatg gaaagtaccg ggacattgtt
1321 cgtcaattca ttaaaggcac agatggattt gctggtggtt tcgctgaatg tttgtgtgga
1381 agtccacatc tataccaggc aggggggagg aaaccttggc acagtatcaa ctttgtgtgt
1441 gcgcatgatg gatttacgct ggctgatttg gtgacatata acaagaagta caactcttca
1501 aatggtgagg ataatagaga tggagaaaat cataacctca gctggaactg tggggaggaa
1561 ggagaatttg caggtttgtc ggtcaaaaga ttgaggaaga ggcaaatgcg caatttcttt
1621 gtttctctca tggtttctca aggtgttccg atgttctaca tgggcgatga atatggccat
1681 acaaaaggag gcaacaacaa cacatactgc catgaccatt atgtcaatta tttccgctgg
1741 gacaagaaag aagaatcctc tgacttgcaa cggttctgct ctcttatgac caaattccgc
1801 aaacaatgcg agtcccttgg cctcgcagac ttcccaacag ctcaacggtt gcattggcat
1861 ggccatcagc ctgggaaacc tgactggtct gagacaagcc gtttcgtggc cttctccacg
1921 aaagatgaaa cgaaaggcga gatctacgtg gccttcaacg ccagccattt gccggcggtt
1981 gttggactcc cagagcgccc aggctaccgc tgggagccgc tggtggacac aggcaagcca
2041 gcgccttatg acttcctcac cgacgacctg cctgatcgtg tcacgccgtc cacctgttct
2101 ctcatttcct caactccaat ctctacccca tgctcagcta ctcctccatc atccttgaat
2161 tgcagcctga tgattgaaag aacaaagtat agcatagtat agcagagtaa aaaacatatg
2221 tttatagccc tttttgcgta tatgttgaag ttgtgcggtc cttcaatttt gaaaaaaaaa
2281 aaaaaaaa
//