LOCUS       LC465120                1111 bp    DNA     linear   VRT 04-SEP-2021
DEFINITION  Tanakia limbata LI003 mitochondrial cytb gene for cytochrome b,
            partial cds, country: Japan:Nagasaki, Hatahoko River.
ACCESSION   LC465120
VERSION     LC465120.1
KEYWORDS    .
SOURCE      mitochondrion Tanakia limbata (oily bitterling)
  ORGANISM  Tanakia limbata
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
            Cypriniformes; Acheilognathidae; Tanakia.
REFERENCE   1  (bases 1 to 1111)
  AUTHORS   Tominaga,K. and Watanabe,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-FEB-2019) to the DDBJ/EMBL/GenBank databases.
            Contact:Koji Tominaga
            Kwansei Gakuin Senior High School; 1-155 Uegahara-ichibancho,
            Nishinomiya, Hyogo 662-8501, Japan
REFERENCE   2  
  AUTHORS   Tominaga,K., Nagata,N., Kitamura,J., Watanabe,K. and Sota,T.
  TITLE     Phylogeography of the bitterling Tanakia lanceolata (Teleostei:
            Cyprinidae) in Japan inferred from mitochondrial cytochrome b gene
            sequences
  JOURNAL   Ichthyol Res 67, 105-116 (2020)
  REMARK    DOI:10.1007/s10228-019-00715-8
COMMENT     
FEATURES             Location/Qualifiers
     source          1..1111
                     /collection_date="2010-09-06"
                     /country="Japan:Nagasaki, Hatahoko River"
                     /db_xref="taxon:80806"
                     /haplotype="LI003"
                     /mol_type="genomic DNA"
                     /note="haplotype frequency: 1 in 13 samples"
                     /organelle="mitochondrion"
                     /organism="Tanakia limbata"
                     /PCR_primers="fwd_name: L14724, fwd_seq:
                     tgacttgaaraaccaycgyyg, rev_name: H15915, rev_seq:
                     acctccgatctycggattacaagac"
     CDS             <1..>1111
                     /codon_start=2
                     /gene="cytb"
                     /product="cytochrome b"
                     /protein_id="BBI55237.1"
                     /transl_table=2
                     /translation="LIKIANDALVDLPTPSNISVWWNFGSLLGLCLISQILTGLFLAM
                     HYTSDISTAFSSVNHICRDVNYGWLIRSLHANGASFFFICIYMHIARGLYYGSYLYKE
                     TWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGDTLVQWSWGGFS
                     VDNATLTRFFAFHFLLPFVVAAATILHLLFLHETGSNNPAGLNSDADKISFHPYFSYK
                     DLLGFVLMLMALTSLALFSPNLLGDSENFIPANPLVTPPHIKPEWYFLFAYAILRSIP
                     NKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPITQFLFWTLVADMIILTWIGGMPV
                     EHPYIIIGQIASVLYFALFLILAPLAGWMENKALKW"
BASE COUNT          280 a          309 c          185 g          337 t
ORIGIN      
        1 actcattaaa atcgctaacg atgcattagt ggacctacca acaccctcca acatctcggt
       61 ctgatggaat tttgggtctc ttttaggact gtgtttaatt tcccaaatcc tgacgggcct
      121 ctttctagca atacactaca cctccgatat ttcaaccgca ttttcttcag ttaaccacat
      181 ctgccgagat gtcaattacg gctgattaat ccgaagttta cacgccaacg gcgcatcatt
      241 tttctttatt tgcatttaca tacacatcgc ccgcggtcta tactacgggt cttatctgta
      301 taaggagacc tgaaacatcg gtgttgttct ccttcttctt gttataataa ccgcttttgt
      361 gggctatgtt ttgccctgag gccaaatatc attctgaggg gccacagtca ttaccaacct
      421 cctctcagca gtcccttata taggagacac cctggttcaa tgaagctgag ggggattttc
      481 ggttgataac gcaacactaa ctcgattctt cgccttccat ttcctcctcc catttgtcgt
      541 cgccgcggcg accatcctcc accttctatt tttacatgag acagggtcga acaaccccgc
      601 cggactaaat tctgacgcgg acaaaatctc cttccacccc tatttttctt acaaagatct
      661 attaggattt gttctcatac ttatagcctt aacatcccta gcactgtttt cacccaacct
      721 actaggtgac tcagaaaatt ttattcccgc caaccctctt gttaccccac cacacattaa
      781 gccagaatga tattttttat ttgcctacgc catcttacgg tccatcccaa ataaactagg
      841 gggtgtgctt gcgttattat tttccattct cgtacttatg gtagtcccaa ttctacatac
      901 ttcaaaacaa cgtggactaa cctttcgccc catcacccaa ttcctattct gaaccctagt
      961 cgcagacata attatcttaa catggatcgg aggtataccc gtagaacacc catacatcat
     1021 tattggacaa atcgcatcgg tgctgtactt cgcgctcttc ctaatcctcg cgccgctagc
     1081 cgggtgaatg gaaaataaag cactgaaatg a
//