LOCUS LC271668 2000 bp DNA linear VRT 20-MAR-2018 DEFINITION Lefua nikkonis mitochondrial cytb gene for cytochrome b, partial cds, haplotype: LNhapBX. ACCESSION LC271668 VERSION LC271668.1 KEYWORDS . SOURCE mitochondrion Lefua nikkonis (stone loach) ORGANISM Lefua nikkonis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Nemacheilidae; Lefua. REFERENCE 1 (bases 1 to 2000) AUTHORS Yamahira,K. and Mokodongan,D.F. TITLE Direct Submission JOURNAL Submitted (26-MAY-2017) to the DDBJ/EMBL/GenBank databases. Contact:Kazunori Yamahira University of the Ryukyus, Tropical Biosphere Research Center; Senbaru 1, Nishihara, Okinawa 903-0213, Japan REFERENCE 2 AUTHORS Ooyagi,A., Mokodongan,D.F., Montenegro,J., Mandagi,I.F., Koizumi,N., Machida,Y., Inomata,N., Shedko,S.V., Hutama,A.A., Hadiaty,R.K. and Yamahira,K. TITLE Phylogeography of the eight-barbel loach Lefua nikkonis (Cypriniformes: Nemacheilidae): how important were straits in northern Japan as biogeographical barriers? JOURNAL Ichthyol Res 65, 115-126 (2018) REMARK DOI:10.1007/s10228-017-0597-0 COMMENT FEATURES Location/Qualifiers source 1..2000 /country="Japan" /db_xref="taxon:187331" /haplotype="LNhapBX" /mol_type="genomic DNA" /organelle="mitochondrion" /organism="Lefua nikkonis" D-loop 1..940 /note="mitochondrial control region" gap 941..1040 /estimated_length=unknown CDS <1041..>2000 /codon_start=1 /gene="cytb" /product="cytochrome b" /protein_id="BBB21991.1" /transl_table=2 /translation="GLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRSMHANGASFFF ICIYMHIARGLYYGSYLYKETWNVGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNL LSAVPYMGNALVQWIWGGFSVDNATLTRFFAFHFLFPFVIAAATVIHLLFLHETGSNN PAGLNSDADKISFHPYFSYKDLFGFAVMLLALTSLALFSPNLLGDPDNFTPANPLVTP PHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMIVPILHTSKQRGLTFRPVTQL FFWALVADMAILTWIGGMPVEHPFIIIGQIASLLYFALFLVLIP" BASE COUNT 581 a 442 c 281 g 596 t ORIGIN 1 tagcatggtt tagcattatt atgcatttat atgcataata atgcatgtgt tacattagtg 61 tatgatacat taatgtatta acaccataaa tttatttgaa acataaagca agtactaact 121 tctaagctat tacataagac atattattaa cattaaacaa aaatttacat aatacattca 181 tattcctgat ctagatgaaa aatgtcccac agaatcttac cttgcgttac tcaaaaataa 241 atttaagcaa gaatttatta atgtagtaag aaaccaccaa ccagtttata taattgcata 301 atatacatga tagaatcagg gacataactg gcgggtggta tattatgaat tattactggc 361 atctgattct cttgtcacgg gcatgggaat gtgaattccc catattcaaa tctatactgg 421 catctgattc atggtgtagt acatatgtct cgttacccac caagccgggc attcttttat 481 atgcataggt tcttttttct ggtttccttt catccacatt tcagagtgca ggctcaaatt 541 ctgaatcaag gtatgaacat ttttccttga tagacacaat ataatgaatg atttgaagac 601 ataagataag aattacattg atttatctca agtgcataat acatccttat tcaacacatc 661 cttatactat atgccccctt ttggtttccg cgcgtcaaac ccccctaccc cctacgctca 721 gtgaatcctg tttttccttg tcaaacccca aaaccaaaga aggctcgacc aagcgcaata 781 aagttaacga gtttaggtag tgttaactta tgccaccaca tattatatat atataacata 841 tacatatatg actccatatt tttttgtcgc tgaaagcctg aaagccagat gaaaaaaatt 901 ataaaataat ttcaacacta aaatttcaaa gaaagtttta nnnnnnnnnn nnnnnnnnnn 961 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1021 nnnnnnnnnn nnnnnnnnnn ggattattcc tagctatgca ttatacatcg gacatctcca 1081 ccgccttctc atcagtggca catatctgcc gagatgttaa ctacggatga ttaattcgaa 1141 gcatgcacgc caatggagca tcattctttt tcatttgtat ttacatacac atcgcccgag 1201 gactatatta tggctcctac ctctacaaag agacatgaaa cgttggagtt gtccttctcc 1261 tactagtaat aatgacagcc tttgtaggct atgtattacc atgaggacaa atatcatttt 1321 gaggtgccac agtcatcacc aacctcctat ccgccgtccc ctacatagga aacgcacttg 1381 tacagtggat ttgagggggc ttctcagtag ataacgcaac attaacacga ttctttgctt 1441 tccacttctt attccccttc gtcatcgccg cagccacagt tattcacctg ctatttctac 1501 acgaaacagg atctaataac ccagcaggct taaactcgga cgcagataaa atctcatttc 1561 acccctactt ctcttataaa gatctctttg gatttgcagt aatacttcta gcacttacat 1621 ctttagccct attctccccc aacctcttag gagacccaga taacttcacc cccgcaaatc 1681 cgctagttac acccccgcac attaaacctg agtggtactt tttatttgcc tacgcaattc 1741 ttcgatctat tccaaataaa cttggcggag tcttagcact tctattttcc attcttgtcc 1801 taataattgt gccaattctc cacacctcaa aacaacgagg actgacattt cggccagtaa 1861 cccaactttt cttctgagcc ctggtcgcag acatggccat cttgacatga attgggggaa 1921 taccagtaga acacccattt attattattg gccaaatcgc atccctctta tactttgcac 1981 tattcctagt cctaatccca //