LOCUS       LC271657                1998 bp    DNA     linear   VRT 20-MAR-2018
DEFINITION  Lefua nikkonis mitochondrial cytb gene for cytochrome b, partial
            cds, haplotype: LNhapBM.
ACCESSION   LC271657
VERSION     LC271657.1
KEYWORDS    .
SOURCE      mitochondrion Lefua nikkonis (stone loach)
  ORGANISM  Lefua nikkonis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
            Cypriniformes; Nemacheilidae; Lefua.
REFERENCE   1  (bases 1 to 1998)
  AUTHORS   Yamahira,K. and Mokodongan,D.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-MAY-2017) to the DDBJ/EMBL/GenBank databases.
            Contact:Kazunori Yamahira
            University of the Ryukyus, Tropical Biosphere Research Center;
            Senbaru 1, Nishihara, Okinawa 903-0213, Japan
REFERENCE   2  
  AUTHORS   Ooyagi,A., Mokodongan,D.F., Montenegro,J., Mandagi,I.F.,
            Koizumi,N., Machida,Y., Inomata,N., Shedko,S.V., Hutama,A.A.,
            Hadiaty,R.K. and Yamahira,K.
  TITLE     Phylogeography of the eight-barbel loach Lefua nikkonis
            (Cypriniformes: Nemacheilidae): how important were straits in
            northern Japan as biogeographical barriers?
  JOURNAL   Ichthyol Res 65, 115-126 (2018)
  REMARK    DOI:10.1007/s10228-017-0597-0
COMMENT     
FEATURES             Location/Qualifiers
     source          1..1998
                     /country="Japan"
                     /db_xref="taxon:187331"
                     /haplotype="LNhapBM"
                     /mol_type="genomic DNA"
                     /organelle="mitochondrion"
                     /organism="Lefua nikkonis"
     D-loop          1..938
                     /note="mitochondrial control region"
     gap             939..1038
                     /estimated_length=unknown
     CDS             <1039..>1998
                     /codon_start=1
                     /gene="cytb"
                     /product="cytochrome b"
                     /protein_id="BBB21980.1"
                     /transl_table=2
                     /translation="GLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRSMHANGASFFF
                     ICIYMHIARGLYYGSYLYKETWNVGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNL
                     LSAVPYMGNALVQWIWGGFSVDNATLTRFFAFHFLFPFVIAAATVIHLLFLHETGSNN
                     PAGLNSDADKISFHPYFSYKDLFGFAVMLLALTSLALFSPNLLGDPDNFTPANPLVTP
                     PHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMIVPILHTSKQRGLTFRPVTQL
                     FFWALVADMAILTWIGGMPVEHPFIIIGQIASLLYFALFLVLIP"
BASE COUNT          579 a          442 c          281 g          596 t
ORIGIN      
        1 tagcatggtt tagcattatt atgcatttat atgcataata atgcatgtgt tacattagtg
       61 tatgatacat taatgtatta acaccataaa tttatttgaa acataaagca agtactaact
      121 tctaagctat tacataagac atattattaa cattaaacaa aaatttacat aatacattca
      181 tattcctgat ctagatgaaa aatgtcccac agaatcttac cttgcgttac tcaaaaataa
      241 atttaagcaa gaatttatta atgtagtaag aaaccaccaa ccagtttata taattgcata
      301 atatacatga tagaatcagg gacataactg gcgggtggta tattatgaat tattactggc
      361 atctgattct cttgtcacgg gcatgggaat gtgaactccc catattcaaa tctatactgg
      421 catctgattc atggtgtagt acatatgtct cgttacccac caagccgggc attcttttat
      481 atgcataggt tcttttttct ggtttccttt catccacatt tcagagtgca ggctcaaatt
      541 ctgaatcaag gtatgaacat tttctcttga tagacacaat ataatgaatg atttaaagac
      601 ataacataag aattacatta atttatccca agtgcataat acatccttat tcaacacatc
      661 cttatactat atgccccctt ttggtttccg cgcgtcaaac ccccctaccc cctacgctca
      721 gtaaatcctg tttttccttg tcaaacccca aaaccaaaga aggctcgacc aagcgcaata
      781 aagttaacga gtttaggtag tgttaactta tgccaccaca tattatatat ataacatata
      841 catatatgac tccatatttt tttgtcgctg aaagcttgaa agccagatga aaaaaattat
      901 aaaataattt caacactaaa atttcaaaga aagttttann nnnnnnnnnn nnnnnnnnnn
      961 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
     1021 nnnnnnnnnn nnnnnnnngg attattccta gctatgcatt atacatcgga catctccacc
     1081 gccttctcat cagtagcaca tatctgccga gatgttaact acggatgatt aattcgaagc
     1141 atgcacgcca atggagcatc gttctttttc atttgtattt acatacacat cgcccgagga
     1201 ctatattatg gctcctacct ctacaaagag acatgaaacg ttggagttgt tcttctccta
     1261 ctagtaataa tgacagcctt tgtgggctat gtattaccat gaggacaaat atcattttga
     1321 ggtgccacag tcatcaccaa cctcctatcc gccgtcccct acataggaaa cgcacttgta
     1381 cagtggattt gagggggctt ctcagtagat aacgcaacat taacacgatt ctttgctttc
     1441 cacttcttat tccccttcgt catcgccgca gccacagtta ttcacctgct gtttctacac
     1501 gaaacaggat ctaataaccc agcaggctta aactcggacg cagataaaat ctcatttcac
     1561 ccttacttct cttataaaga tctctttggg tttgcagtaa tacttctagc acttacatct
     1621 ttagccctat tttcccccaa cctcttagga gacccagata acttcacccc cgcaaatccg
     1681 ctagttacac ccccgcacat taaacctgag tggtactttt tatttgccta cgcaattctt
     1741 cgatctattc caaataaact tggcggagtc ttagcacttc tattttccat tcttgtccta
     1801 ataattgtgc caattctcca cacctcaaaa caacgaggac tgacatttcg gccagtaacc
     1861 caacttttct tctgagccct ggtcgcagac atggccatct tgacatgaat tgggggaata
     1921 ccagtagaac acccatttat tattatcggc caaatcgcat ccctcttata ctttgcacta
     1981 ttcctagtcc taatcccg
//