LOCUS LC271615 1989 bp DNA linear VRT 20-MAR-2018 DEFINITION Lefua nikkonis mitochondrial cytb gene for cytochrome b, partial cds, haplotype: LNhapW. ACCESSION LC271615 VERSION LC271615.1 KEYWORDS . SOURCE mitochondrion Lefua nikkonis (stone loach) ORGANISM Lefua nikkonis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Nemacheilidae; Lefua. REFERENCE 1 (bases 1 to 1989) AUTHORS Yamahira,K. and Mokodongan,D.F. TITLE Direct Submission JOURNAL Submitted (26-MAY-2017) to the DDBJ/EMBL/GenBank databases. Contact:Kazunori Yamahira University of the Ryukyus, Tropical Biosphere Research Center; Senbaru 1, Nishihara, Okinawa 903-0213, Japan REFERENCE 2 AUTHORS Ooyagi,A., Mokodongan,D.F., Montenegro,J., Mandagi,I.F., Koizumi,N., Machida,Y., Inomata,N., Shedko,S.V., Hutama,A.A., Hadiaty,R.K. and Yamahira,K. TITLE Phylogeography of the eight-barbel loach Lefua nikkonis (Cypriniformes: Nemacheilidae): how important were straits in northern Japan as biogeographical barriers? JOURNAL Ichthyol Res 65, 115-126 (2018) REMARK DOI:10.1007/s10228-017-0597-0 COMMENT FEATURES Location/Qualifiers source 1..1989 /country="Japan" /db_xref="taxon:187331" /haplotype="LNhapW" /mol_type="genomic DNA" /organelle="mitochondrion" /organism="Lefua nikkonis" D-loop 1..929 /note="mitochondrial control region" gap 930..1029 /estimated_length=unknown CDS <1030..>1989 /codon_start=1 /gene="cytb" /product="cytochrome b" /protein_id="BBB21939.1" /transl_table=2 /translation="GLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRSMHANGASFFF ICIYMHIARGLYYGSYLYKETWNVGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNL LSAVPYVGNALVQWIWGGFSVDNATLTRFFAFHFLFPFVIAAATIIHLLFLHETGSNN PAGLNSDADKISFHPYFSYKDLFGFAVMLLALTSLALFSPNLLGDPDNFTPANPLVTP PHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMIVPILHTSKQRGLTFRPVTQL FFWALVADMAILTWIGGMPVEHPFIIIGQIASLLYFALFLVLIP" BASE COUNT 584 a 433 c 274 g 598 t ORIGIN 1 tagcgtggtt tagcatttat atgcatagca atgcatatat tacattagtg tatgatacat 61 taatgtatta acaccataaa tttatttgaa acataaagca agtactaact tctaagctat 121 tacataagac atattattaa cattaaacaa aaatttacat aatacattca tattcctgat 181 ctagatgaaa aatgtcccac agaatcttac cttgcgttac tcaaaaataa atttaagcaa 241 gaatttatta atgtagtaag aaaccaccaa ccagtttata taattgcata atatacatga 301 tagaatcagg gacataactg gcgggtggta tattatgaat tattactggc atctgattct 361 cttgtcacgg gcatgggaat gtgaattccc catattcaaa tctatactgg catctgattc 421 atggtgtagt acatatgtct cgttacccac caagccgggc attcttttat atgcataggt 481 tctttttttt ggtttccttt catccacatt tcagagtgca ggcacaaatt ctgaatcaag 541 gtatgaacat ttttccttga tagacacaat ataatgaatg atttaaagac ataatataag 601 aattacatta atttatctca agtgcataat acatccttat tcaacacatc cttatactat 661 atgccccctt ttggtttccg cgcgtcaaac ccccctaccc cctacgctca gtaaatcctg 721 tttttccttg tcaaacccca aaaccaaaga aggctcgacc aagcgcaata aagttaacga 781 gtttaggtag tgttaactta tgccaccaca tattatatat ataacatata tatatatatg 841 actccatttt ttttgtcgct gaaagcctga aagccagacg aaaaaaatta taaaataatt 901 tcaacactga aatttcaaag aaagttttan nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 961 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1021 nnnnnnnnng gattattcct agctatacat tatacatcgg acatctccac cgccttctca 1081 tcagtagcac atatctgccg agatgttaac tacggatgat taattcgaag catgcacgcc 1141 aatggagcat cattcttttt catttgtatt tacatacaca tcgcccgagg actatattat 1201 ggctcctacc tctacaaaga gacatgaaac gttggagttg tccttctcct actagtaata 1261 atgacagcct ttgtaggcta tgtattacca tgaggacaaa tatcattttg aggtgccaca 1321 gtcatcacta acctcctatc cgccgtcccc tacgtaggaa acgcacttgt acagtggatt 1381 tgagggggct tctcagtaga taacgcaaca ttaacacgat tctttgcttt ccacttctta 1441 ttccccttcg tcatcgccgc agccacaatt attcacctac tatttctaca cgaaacaggg 1501 tctaataacc cagcaggctt aaactcggac gcagataaaa tctcatttca cccttacttc 1561 tcttataaag atctctttgg atttgcagta atacttctag cacttacatc tttagctcta 1621 ttctccccca acctcttagg ggacccagat aacttcaccc ccgcaaatcc actagttaca 1681 cccccacata ttaaacctga atggtacttt ttatttgcct acgcaattct tcgatctatt 1741 ccaaataaac ttggcggagt attagcactt ctattttcca ttcttgtcct aataattgtg 1801 ccaattctcc acacctcaaa acaacgagga ctgacatttc ggccagtaac ccaacttttc 1861 ttctgagccc tggtcgcaga tatggccatc ttgacatgaa ttgggggaat accagtagaa 1921 cacccattta ttattattgg ccaaattgca tcccttttat actttgcact gttcctagtc 1981 ctaatccca //