LOCUS LC271614 1988 bp DNA linear VRT 20-MAR-2018 DEFINITION Lefua nikkonis mitochondrial cytb gene for cytochrome b, partial cds, haplotype: LNhapV. ACCESSION LC271614 VERSION LC271614.1 KEYWORDS . SOURCE mitochondrion Lefua nikkonis (stone loach) ORGANISM Lefua nikkonis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Nemacheilidae; Lefua. REFERENCE 1 (bases 1 to 1988) AUTHORS Yamahira,K. and Mokodongan,D.F. TITLE Direct Submission JOURNAL Submitted (26-MAY-2017) to the DDBJ/EMBL/GenBank databases. Contact:Kazunori Yamahira University of the Ryukyus, Tropical Biosphere Research Center; Senbaru 1, Nishihara, Okinawa 903-0213, Japan REFERENCE 2 AUTHORS Ooyagi,A., Mokodongan,D.F., Montenegro,J., Mandagi,I.F., Koizumi,N., Machida,Y., Inomata,N., Shedko,S.V., Hutama,A.A., Hadiaty,R.K. and Yamahira,K. TITLE Phylogeography of the eight-barbel loach Lefua nikkonis (Cypriniformes: Nemacheilidae): how important were straits in northern Japan as biogeographical barriers? JOURNAL Ichthyol Res 65, 115-126 (2018) REMARK DOI:10.1007/s10228-017-0597-0 COMMENT FEATURES Location/Qualifiers source 1..1988 /country="Japan" /db_xref="taxon:187331" /haplotype="LNhapV" /mol_type="genomic DNA" /organelle="mitochondrion" /organism="Lefua nikkonis" D-loop 1..928 /note="mitochondrial control region" gap 929..1028 /estimated_length=unknown CDS <1029..>1988 /codon_start=1 /gene="cytb" /product="cytochrome b" /protein_id="BBB21938.1" /transl_table=2 /translation="GLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRSMHANGASFFF ICIYMHIARGLYYGSYLYKETWNVGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNL LSAVPYVGNALVQWIWGGFSVDNATLTRFFAFHFLFPFVIAAATIIHLLFLHETGSNN PAGLNSDADKISFHPYFSYKDLFGFAVMLLALTSLALFSPNLLGDPDNFTPANPLVTP PHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMIVPILHTSKQRGLTFRPVTQL FFWALVADMAILTWIGGMPVEHPFIIIGQIASLLYFALFLVLIP" BASE COUNT 583 a 435 c 273 g 597 t ORIGIN 1 tagcgtggtt tagcatttat atgcatagca atgcatatat tacattagtg tatgatacat 61 taatgtatta acaccataaa tttatttgaa acataaagca agtactaact tctaagctat 121 tacataagac atattattaa cattaaacaa aaatttacat aatacattca tattcctgat 181 ctagatgaaa aatgtcccac agaatcttac cttgcgttac tcaaaaataa atttaagcaa 241 gaatttatta atgtagtaag aaaccaccaa ccagtttata taattgcata atatacatga 301 tagaatcagg gacataactg gcgggtggta tattatgaat tattactggc atctgattct 361 cttgtcacgg gcatgggaat gtgaattccc catattcaaa tctatactgg catctgattc 421 atggtgtagt acatatgtct cgttacccac caagccgggc attcttttat atgcataggt 481 tctttttttt ggtttccttt catccacatt tcagagtgca ggcacaaatt ctgaatcaag 541 gtatgaacat ttttccttga tagacacaat ataatgaatg atttaaagac ataacataag 601 aattacatta atttatctca agtgcataat acatccttat tcaacacatc cttatactat 661 atgccccctt ttggtttccg cgcgtcaaac ccccctaccc cctacgctca gtaaatcctg 721 tttttccttg tcaaacccca aaaccaaaga aggctcgacc aagcgcaata aagttaacga 781 gtttaggtag tgttaactta tgccaccaca tattatatat ataacatata tatatatatg 841 actccttttt tttgtcgctg aaagcctaaa agccagacga aaaaaattat aaaataattt 901 caacactgaa atttcaaaga aagttttann nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 961 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1021 nnnnnnnngg attattccta gctatacatt atacatcgga catctccacc gccttctcat 1081 cagtagcaca tatctgccga gatgttaact acggatgatt aattcgaagc atgcacgcca 1141 atggagcatc attctttttc atttgtattt acatacacat cgcccgagga ctatattatg 1201 gctcctacct ctacaaagag acatgaaacg ttggagttgt ccttctccta ctagtaataa 1261 tgacagcctt tgtaggctat gtattaccat gaggacaaat atcattttga ggtgccacag 1321 tcatcactaa cctcctatcc gccgtcccct acgtaggaaa cgcacttgta cagtggattt 1381 gagggggctt ctcagtagat aacgcaacat taacacgatt ctttgctttc cacttcttat 1441 tccccttcgt catcgccgca gccacaatta ttcacctact atttctacac gaaacagggt 1501 ctaataaccc agcaggctta aactcggacg cagataaaat ctcatttcac ccttacttct 1561 cttataaaga tctctttgga tttgcagtaa tacttctagc acttacatct ttagctctat 1621 tctcccccaa cctcttaggg gacccagata acttcacccc cgcaaatcca ctagttacac 1681 ccccacatat taaacctgaa tggtactttt tatttgccta cgcaattctt cgatctattc 1741 caaataaact tggcggagtc ttagcacttc tattttccat tcttgtccta ataattgtgc 1801 caattctcca cacctcaaaa caacgaggac tgacatttcg gccagtaacc caacttttct 1861 tctgagccct ggtcgcagat atggccatct tgacatgaat tgggggaata ccagtagaac 1921 acccatttat tattattggc caaattgcat cccttttata ctttgcactg ttcctagtcc 1981 taatccca //