LOCUS LC271601 1998 bp DNA linear VRT 20-MAR-2018 DEFINITION Lefua nikkonis mitochondrial cytb gene for cytochrome b, partial cds, haplotype: LNhapI. ACCESSION LC271601 VERSION LC271601.1 KEYWORDS . SOURCE mitochondrion Lefua nikkonis (stone loach) ORGANISM Lefua nikkonis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Nemacheilidae; Lefua. REFERENCE 1 (bases 1 to 1998) AUTHORS Yamahira,K. and Mokodongan,D.F. TITLE Direct Submission JOURNAL Submitted (26-MAY-2017) to the DDBJ/EMBL/GenBank databases. Contact:Kazunori Yamahira University of the Ryukyus, Tropical Biosphere Research Center; Senbaru 1, Nishihara, Okinawa 903-0213, Japan REFERENCE 2 AUTHORS Ooyagi,A., Mokodongan,D.F., Montenegro,J., Mandagi,I.F., Koizumi,N., Machida,Y., Inomata,N., Shedko,S.V., Hutama,A.A., Hadiaty,R.K. and Yamahira,K. TITLE Phylogeography of the eight-barbel loach Lefua nikkonis (Cypriniformes: Nemacheilidae): how important were straits in northern Japan as biogeographical barriers? JOURNAL Ichthyol Res 65, 115-126 (2018) REMARK DOI:10.1007/s10228-017-0597-0 COMMENT FEATURES Location/Qualifiers source 1..1998 /country="Japan" /db_xref="taxon:187331" /haplotype="LNhapI" /mol_type="genomic DNA" /organelle="mitochondrion" /organism="Lefua nikkonis" D-loop 1..938 /note="mitochondrial control region" gap 939..1038 /estimated_length=unknown CDS <1039..>1998 /codon_start=1 /gene="cytb" /product="cytochrome b" /protein_id="BBB21925.1" /transl_table=2 /translation="GLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRSMHANGASFFF ICIYMHIARGLYYGSYLYKETWNVGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNL LSAVPYMGNALVQWIWGGFSVDNATLTRFFAFHFLFPFVIAAATVIHLLFLHETGSNN PAGLNSDADKISFHPYFSYKDLFGFAVMLLALTSLALFSPNLLGDPDNFTPANPLVTP PHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMIVPILHTSKQRGLTFRPVTQL FFWTLVADMAILTWIGGMPVEHPFIIIGQIASLLYFALFLVLIP" BASE COUNT 580 a 443 c 281 g 594 t ORIGIN 1 tagcatggtt tagcattatt atgcatttat atgcataata atgcatgtgt tacattagtg 61 tatgatacat taatgtatta acaccataaa tttatttgaa acataaagca agtactaact 121 tctaagctat tacataagac atattattaa cattaaacaa aaatttacat aatacattca 181 tattcctgat ctagatgaaa aatgtcccac agaatcttac cttgcgttac tcaaaaataa 241 atttaagcaa gaatttatta atgtagtaag aaaccaccaa ccagtttata taattgcata 301 atatacatga tagaatcagg gacataactg gcgggtggta tattatgaat tattactggc 361 atctgattct cttgtcacgg gcatgggaat gtgaattccc catattcaaa tctatactgg 421 catctgattc atggtgtagt acatatgtct cgttacccac caagccgggc attcttttat 481 atgcataggt tcttttttct ggtttccttt catccacatt tcagagtgca ggctcaaatt 541 ctgaatcaag gtatgaacat ttttccttga tagacacaat ataatgaatg atttgaagac 601 ataagataag aattacattg atttatctca agtgcataat acatccttat tcaacacatc 661 cttatactat atgccccctt ttggtttccg cgcgtcaaac ccccctaccc cctacgctca 721 gtgaatcctg tttttccttg tcaaacccca aaaccaaaga aggctcgacc aagcgcaata 781 aagttaacga gtttaggtag tgttaactta tgccaccaca tattatatat ataacatata 841 catatatgac tccatatttt tttgtcgctg aaagcctgaa agccagatga aaaaaattat 901 aaaataattt caacactaaa atttcaaaga aagttttann nnnnnnnnnn nnnnnnnnnn 961 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1021 nnnnnnnnnn nnnnnnnngg attattccta gctatgcact atacatcgga catctccacc 1081 gccttctcat cagtggcaca tatctgccga gatgttaact acgggtgatt aattcgaagc 1141 atgcacgcca atggagcatc attctttttc atttgtattt acatacacat cgcccgagga 1201 ctatattatg gctcctacct ctacaaagag acatgaaacg ttggagttgt ccttctccta 1261 ctagtaataa tgacagcctt tgtaggctat gtattaccat gaggacaaat atcattttga 1321 ggtgccacag tcatcaccaa cctcctatcc gccgtcccct acataggaaa cgcacttgta 1381 cagtggattt gagggggctt ctcagtagat aacgcaacat taacacgatt ctttgctttc 1441 cacttcttat tccccttcgt catcgccgca gccacagtta ttcacctgct atttctacac 1501 gaaacaggat ctaataaccc agcaggctta aactcggacg cagataaaat ctcatttcac 1561 ccctacttct cttataaaga tctctttgga tttgcagtaa tacttctagc acttacatct 1621 ttagccctat tctcccccaa cctcttagga gacccagata acttcacccc cgcaaatccg 1681 ctagttacac ccccgcacat taaacctgag tggtactttt tatttgccta cgcaattctt 1741 cgatctattc caaataaact tggcggagtc ttagcacttc tattttccat tcttgtccta 1801 ataattgtgc caattctcca cacctcaaaa caacgaggac tgacatttcg gccagtaacc 1861 caacttttct tctgaaccct ggtcgcagac atggccatct tgacatgaat tgggggaata 1921 ccagtagaac acccatttat tattattggc caaatcgcat ccctcttata ctttgcacta 1981 ttcctagtcc taatccca //