LOCUS LC108090 1141 bp DNA linear VRT 17-DEC-2016 DEFINITION Pungitius pungitius mitochondrial cytb gene for cytochrome b, complete cds, haplotype: E1-Ppu1. ACCESSION LC108090 VERSION LC108090.1 KEYWORDS . SOURCE mitochondrion Pungitius pungitius (ninespine stickleback) ORGANISM Pungitius pungitius Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Gasterosteales; Gasterosteidae; Pungitius. REFERENCE 1 (bases 1 to 1141) AUTHORS Takahashi,H. TITLE Direct Submission JOURNAL Submitted (05-JAN-2016) to the DDBJ/EMBL/GenBank databases. Contact:Hiroshi Takahashi National Fisheries University, Applied Aquabiology; 2-7-1 Nagata-honmachi, Shimonoseki, Yamaguchi 759-6595, Japan URL :http://www.fish-u.ac.jp/e-index.html REFERENCE 2 AUTHORS Takahashi,H., Moller,P.R., Shedko,S.V., Ramatulla,T., Joen,S.-R., Zhang,C.-G., Sideleva,V.G., Takata,K., Sakai,H., Goto,A. and Nishida,M. TITLE Species phylogeny and diversification process of Northeast Asian Pungitius revealed by AFLP and mtDNA markers JOURNAL Mol. Phylogenet. Evol. 99, 44-52 (2016) REMARK DOI:10.1016/j.ympev.2016.03.022 COMMENT FEATURES Location/Qualifiers source 1..1141 /db_xref="taxon:134920" /haplotype="E1-Ppu1" /mol_type="genomic DNA" /organelle="mitochondrion" /organism="Pungitius pungitius" CDS 1..1141 /codon_start=1 /gene="cytb" /note="TAA stop codon is completed by the addition of 3' A residues to the mRNA" /product="cytochrome b" /protein_id="BAW32895.1" /transl_except=(pos:1141,aa:TERM) /transl_table=2 /translation="MASLRKTHPLLKIANNALVDLPAPSNISVWWNFGSLLGLCLIIQ ILTGLFLAMHYTSDIATAFSSVGHICRDVNYGWLIRNLHANGASFFFICIYMHIGRGL YYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNSL VQWIWGGFSVDNATLTRFFAFHFLFPFVIAGATLVHLLFLHQTGSNNPLGLNSDADKI SFHPYFSYKDLLGFAALLVSLTALALFAPNLLGDPDNFTPANPLVTPPHIKPEWYFLF AYAILRSIPNKLGGVLALLASILVLMVVPILHTSKQRGLTFRPVTQFLFWTLIADVAI LTWIGGMPVEHPFIIIGQVASVLYFSLFLVLYPGAAMVENKMLEWT" BASE COUNT 288 a 353 c 180 g 320 t ORIGIN 1 atggcaagcc tacgaaaaac gcaccctcta ctaaaaatcg ctaacaatgc attagttgac 61 ctccccgccc cctcaaatat ctccgtatgg tgaaactttg gttccctact tggactctgc 121 ttaattatcc aaatcctaac tggccttttt cttgctatac attacacatc agacattgcc 181 acagcatttt catccgtcgg acatatttgc cgagacgtaa actacggatg gctaatccga 241 aacctacatg ccaatggagc atcatttttc ttcatctgta tttacataca catcggacgg 301 ggactttact atggctccta cttatacaaa gaaacatgaa acattggggt tgttctacta 361 cttctagtca taataacagc attcgttggg tacgtcctac catggggaca gatatccttc 421 tggggtgcca cagtcatcac caaccttcta tcagctgtcc cctatgtggg caactcgcta 481 gtacaatgaa tctgaggcgg cttttctgtc gacaacgcta ccctaacccg attctttgcc 541 ttccactttc tatttccctt tgttattgct ggggccacat tagttcacct tctgttcctc 601 caccaaaccg gctcaaacaa ccccctcggc ctaaactcag acgctgacaa aatctcgttc 661 cacccatact tttcttataa agacctcctt ggctttgcag ccctacttgt ctccctcaca 721 gccctggcac tcttcgcccc taatctgctg ggagatcccg ataacttcac ccccgcaaac 781 ccactagtta ctcctccaca catcaaaccc gaatgatact tcttgtttgc ctacgccatc 841 cttcgatcca tcccaaacaa actcggaggg gtactcgccc ttctcgcctc cattttagtc 901 ttaatagtag ttcctatcct tcacacatcc aaacaacgag gattaacatt ccgtcccgtc 961 actcaattcc tattctggac cctcatcgca gacgtcgcca tcctcacctg aatcggcggc 1021 ataccagtcg aacacccgtt catcatcatt gggcaagttg catctgtact atacttctcc 1081 ctattcctag ttctctaccc aggagcagca atagtggaaa acaaaatact tgaatgaaca 1141 t //