LOCUS       LC108086                1141 bp    DNA     linear   VRT 17-DEC-2016
DEFINITION  Pungitius pungitius mitochondrial cytb gene for cytochrome b,
            complete cds, haplotype: AN-Ppu1.
ACCESSION   LC108086
VERSION     LC108086.1
KEYWORDS    .
SOURCE      mitochondrion Pungitius pungitius (ninespine stickleback)
  ORGANISM  Pungitius pungitius
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Perciformes; Cottioidei;
            Gasterosteales; Gasterosteidae; Pungitius.
REFERENCE   1  (bases 1 to 1141)
  AUTHORS   Takahashi,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JAN-2016) to the DDBJ/EMBL/GenBank databases.
            Contact:Hiroshi Takahashi
            National Fisheries University, Applied Aquabiology; 2-7-1
            Nagata-honmachi, Shimonoseki, Yamaguchi 759-6595, Japan
            URL    :http://www.fish-u.ac.jp/e-index.html
REFERENCE   2  
  AUTHORS   Takahashi,H., Moller,P.R., Shedko,S.V., Ramatulla,T., Joen,S.-R.,
            Zhang,C.-G., Sideleva,V.G., Takata,K., Sakai,H., Goto,A. and
            Nishida,M.
  TITLE     Species phylogeny and diversification process of Northeast Asian
            Pungitius revealed by AFLP and mtDNA markers
  JOURNAL   Mol. Phylogenet. Evol. 99, 44-52 (2016)
  REMARK    DOI:10.1016/j.ympev.2016.03.022
COMMENT     
FEATURES             Location/Qualifiers
     source          1..1141
                     /db_xref="taxon:134920"
                     /haplotype="AN-Ppu1"
                     /mol_type="genomic DNA"
                     /organelle="mitochondrion"
                     /organism="Pungitius pungitius"
     CDS             1..1141
                     /codon_start=1
                     /gene="cytb"
                     /note="TAA stop codon is completed by the addition of 3'
                     A residues to the mRNA"
                     /product="cytochrome b"
                     /protein_id="BAW32891.1"
                     /transl_except=(pos:1141,aa:TERM)
                     /transl_table=2
                     /translation="MASLRKTHPLLKIANNALVDLPAPSNISVWWNFGSLLGLCLIIQ
                     ILTGLFLAMHYTSDIATAFSSVGHICRDVNYGWLIRNLHANGASFFFICIYMHIGRGL
                     YYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNSL
                     VQWIWGGFSVDNATLTRFFAFHFLFPFVIAGATLVHLLFLHQTGSNNPLGLNSDADKI
                     SFHPYFSYKDLLGFAALLVSLTALALFAPNLLGDPDNFTPANPLVTPPHIKPEWYFLF
                     AYAILRSIPNKLGGVLALLASILVLMVVPILHTSKQRGLTFRPVTQFLFWTLIADVAI
                     LTWIGGMPVEHPFIIIGQVASVLYFSLFLVLYPGAAMVENKMLEWT"
BASE COUNT          289 a          352 c          180 g          320 t
ORIGIN      
        1 atggcaagcc tacgaaaaac gcaccctcta ctaaaaatcg ctaacaatgc attagttgac
       61 ctccccgccc cctcaaatat ctccgtatga tgaaactttg gttccctact tggactctgc
      121 ttaatcatcc aaatcctaac tggccttttt cttgctatac attacacatc agacattgcc
      181 acagcctttt catccgtcgg acatatttgc cgagacgtaa actacggatg gctaatccga
      241 aacctacatg ccaatggagc atcatttttc ttcatctgta tttacataca catcggacga
      301 ggactttact atggctccta cttatacaaa gaaacatgaa acattggggt tgttctacta
      361 cttctagtca tgataacagc attcgttggg tacgtcctac catggggaca gatatccttc
      421 tggggtgcca cagtcatcac caaccttcta tcagctgtcc cctatgtggg caactcgcta
      481 gtacagtgaa tctgaggcgg cttttctgtc gacaacgcta ccctaacccg attctttgcc
      541 ttccactttc tatttccctt tgttattgct ggagccacat tagttcacct tctgttcctc
      601 caccaaaccg gctcaaacaa ccccctcggc ctaaactcag acgctgacaa aatctcgttc
      661 cacccatact tttcttataa agacctcctt ggctttgcag ccctacttgt ctccctcaca
      721 gccctggcac tcttcgcccc taatctgctg ggagatccag ataacttcac ccccgcaaac
      781 ccactagtta ctcctccaca catcaaaccc gaatgatact tcttgtttgc ctacgccatc
      841 cttcgatcca tcccaaacaa actaggaggg gtactcgccc ttctcgcctc cattttagtc
      901 ttaatggtag ttcctatcct tcacacatcc aaacaacgag gattaacatt ccgtcccgtc
      961 actcaattcc tattctggac cctcatcgca gacgtcgcca tcctcacctg aatcggcggc
     1021 ataccagtcg aacacccgtt catcatcatt gggcaagttg catctgtact atacttctcc
     1081 ctattcctag ttctttaccc aggagcagca atagtggaaa acaaaatact tgaatgaaca
     1141 t
//