LOCUS LC108050 1141 bp DNA linear VRT 17-DEC-2016 DEFINITION Pungitius pungitius mitochondrial cytb gene for cytochrome b, complete cds, haplotype: S2-Ppo2. ACCESSION LC108050 VERSION LC108050.1 KEYWORDS . SOURCE mitochondrion Pungitius pungitius (ninespine stickleback) ORGANISM Pungitius pungitius Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Gasterosteales; Gasterosteidae; Pungitius. REFERENCE 1 (bases 1 to 1141) AUTHORS Takahashi,H. TITLE Direct Submission JOURNAL Submitted (05-JAN-2016) to the DDBJ/EMBL/GenBank databases. Contact:Hiroshi Takahashi National Fisheries University, Applied Aquabiology; 2-7-1 Nagata-honmachi, Shimonoseki, Yamaguchi 759-6595, Japan URL :http://www.fish-u.ac.jp/e-index.html REFERENCE 2 AUTHORS Takahashi,H., Moller,P.R., Shedko,S.V., Ramatulla,T., Joen,S.-R., Zhang,C.-G., Sideleva,V.G., Takata,K., Sakai,H., Goto,A. and Nishida,M. TITLE Species phylogeny and diversification process of Northeast Asian Pungitius revealed by AFLP and mtDNA markers JOURNAL Mol. Phylogenet. Evol. 99, 44-52 (2016) REMARK DOI:10.1016/j.ympev.2016.03.022 COMMENT FEATURES Location/Qualifiers source 1..1141 /db_xref="taxon:134920" /haplotype="S2-Ppo2" /mol_type="genomic DNA" /organelle="mitochondrion" /organism="Pungitius pungitius" CDS 1..1141 /codon_start=1 /gene="cytb" /note="TAA stop codon is completed by the addition of 3' A residues to the mRNA" /product="cytochrome b" /protein_id="BAW32855.1" /transl_except=(pos:1141,aa:TERM) /transl_table=2 /translation="MASLRKTHPLLKIANNALVDLPAPSNISVWWNFGSLLGLCLIIQ ILTGLFLAMHYTSDIATAFSSIGHICRDVNYGWLIRNLHANGASFFFICIYMHIGRGL YYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNSL VEWIWGGFSVDNATLTRFFAFHFLFPFVIAGATLVHLLFLHQTGSNNPLGLNSDADKI SFHPYFSYKDLLGFAALLVSLTALALFAPNLLGDPDNFTPANPLVTPPHIKPEWYFLF AYAILRSIPNKLGGVLALLASILILMVVPILHTSKQQGLTFRPVTQFLFWTLIADVAI LTWIGGMPVEHPFIIIGQVASVLYFSLFLVLYPGAAMVENKMLEWT" BASE COUNT 287 a 347 c 178 g 329 t ORIGIN 1 atggcaagcc tacgaaaaac gcaccctcta ctaaaaatcg ctaacaatgc attagttgac 61 ctccccgccc cctcaaatat ttcagtatga tgaaactttg gttccttact tggactctgc 121 ttaatcatcc aaatcctaac tggccttttt cttgctatac actacacatc agatattgcc 181 acagcctttt catccatcgg acatatttgc cgagacgtaa actacggatg actaatccga 241 aacctgcatg ccaatggagc atcatttttc ttcatctgta tttacatgca cattggacga 301 ggactttatt atggctccta cttatacaaa gaaacatgaa acattggggt tgtcctccta 361 cttctagtca tgataacagc attcgttggg tacgtcctcc catgaggaca gatatctttc 421 tgaggtgcca cagtcattac caaccttcta tcagctgtcc cctacgtggg taactcacta 481 gtagagtgaa tttgaggggg cttttctgtc gacaacgcta ccctaacccg attctttgcc 541 ttccattttc tatttccctt tgtcattgcc ggggccacgc tcgttcacct tctattcctc 601 caccaaaccg gctcaaacaa tcccctcggc ctaaactcag acgctgacaa aatctccttc 661 cacccatact tttcttacaa agacctcctc ggctttgcag ccctccttgt ctcccttaca 721 gcccttgcac tcttcgctcc aaatctgctc ggagatcctg ataacttcac ccccgcaaac 781 ccactagtta cccctccaca catcaagcct gaatgatact tcttgtttgc ttacgccatc 841 cttcgatcca tcccaaacaa gcttggggga gtactcgccc ttctcgcctc tatcttaatc 901 ttaatggtgg tcccaatcct tcacacatct aagcagcagg gattaacatt ccgacccgtc 961 actcaatttc tattctggac cctcatcgca gacgtcgcca ttctcacctg aatcggcggc 1021 ataccagtcg aacacccttt catcatcatt ggacaagttg catctgtact atacttctcc 1081 ctattcctag tcctttatcc aggagcagca atagtagaaa acaaaatact tgaatgaaca 1141 t //