LOCUS       LC097623                 629 bp    DNA     linear   VRT 28-SEP-2018
DEFINITION  Squalidus japonicus japonicus mitochondrial cytb gene for
            cytochrome b, partial cds, haplotype: Sjjap_db01.
ACCESSION   LC097623
VERSION     LC097623.1
KEYWORDS    .
SOURCE      mitochondrion Squalidus japonicus japonicus
  ORGANISM  Squalidus japonicus japonicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
            Cypriniformes; Gobionidae; Hemibarbus-Squalidus clade; Squalidus.
REFERENCE   1  (bases 1 to 629)
  AUTHORS   Tabata,R. and Watanabe,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-NOV-2015) to the DDBJ/EMBL/GenBank databases.
            Contact:Ryoichi Tabata
            Lake Biwa Museum; 1091, Oroshimo, Kusatsu, Shiga 525-0001, Japan
REFERENCE   2  
  AUTHORS   Tabata,R., Kakioka,R., Tominaga,K., Komiya,T. and Watanabe,K.
  TITLE     Phylogeny and historical demography of endemic fishes in Lake
            Biwa: the ancient lake as a promoter of evolution and
            diversification of freshwater fishes in western Japan
  JOURNAL   Ecol Evol 6, 2601-2623 (2016)
  REMARK    DOI:10.1002/ece3.2070
COMMENT     
FEATURES             Location/Qualifiers
     source          1..629
                     /country="Japan:Shiga"
                     /db_xref="taxon:1590809"
                     /haplotype="Sjjap_db01"
                     /mol_type="genomic DNA"
                     /organelle="mitochondrion"
                     /organism="Squalidus japonicus japonicus"
                     /sub_species="japonicus"
     CDS             <1..>629
                     /codon_start=1
                     /gene="cytb"
                     /product="cytochrome b"
                     /protein_id="BAU78651.1"
                     /transl_table=2
                     /translation="DNATLTRFFAFHFLLPFVVAAATLLHLLFLHETGSNNPAGLNSD
                     ADKISFHPYFSYKDLLGFVLMLLALTSLALFSPNLLGDPENFTPANPLVTPPHIKPEW
                     YFLFAYAILRSIPNKLGGVLALLFSILVLLVVPILHTSKQRGLTFRPLTQFLFWTLVA
                     DMAILTWIGGMPVEHPYVIIGQIASVLYFALFLVLIPLSGWVENKALKWA"
BASE COUNT          172 a          204 c           84 g          169 t
ORIGIN      
        1 gacaatgcaa cactaacacg atttttcgca ttccacttcc tcctcccctt cgtagttgcc
       61 gccgcaaccc tcctccacct cctattcctt cacgaaacag gctcaaacaa cccagccgga
      121 ttaaactccg acgcagataa aatttctttc cacccatact tctcttacaa agacctactt
      181 ggcttcgtac tcatgctatt agccctaaca tctctagctc tcttttcccc aaacctctta
      241 ggagacccag aaaacttcac gcccgccaac ccgctagtca ctccgcccca catcaaacca
      301 gaatgatact tcctattcgc ttatgctatt ttacggtcaa ttcctaataa actaggaggc
      361 gttcttgcac tattattctc aattttagtc ctcctagtag tcccaatttt acacacctca
      421 aaacaacgag gacttacatt ccgtccccta acccaattcc tattctgaac cctagtagca
      481 gacatggcca tcctaacatg aatcggagga atacccgtag aacacccata cgtcatcatt
      541 ggccaaatcg catccgtcct atactttgct ctattcctag tccttatccc actatccggg
      601 tgagtggaga ataaagcatt aaaatgagc
//