LOCUS LC075770 4525 bp DNA linear PLN 03-JUN-2016 DEFINITION Ipomoea nil InWDR1 gene for WD40 repeat protein, complete cds, allele: ca-3, cultivar: Yakuyou-shirohana. ACCESSION LC075770 VERSION LC075770.1 KEYWORDS . SOURCE Ipomoea nil (Japanese morning glory) ORGANISM Ipomoea nil Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea. REFERENCE 1 (bases 1 to 4525) AUTHORS Hoshino,A. TITLE Direct Submission JOURNAL Submitted (22-AUG-2015) to the DDBJ/EMBL/GenBank databases. Contact:Atsushi Hoshino National Institute for Basic Biology, Laboratory of Biological Diversity; Nishigonaka 38, Myodaiji, Okazaki, Aichi 444-8585, Japan URL :http://www.nibb.ac.jp/hoshino/ REFERENCE 2 AUTHORS Hoshino,A., Yoneda,Y. and Kuboyama,T. TITLE A Stowaway transposon disrupts the InWDR1 gene controlling flower and seed coloration in a medicinal cultivar of the Japanese morning glory JOURNAL Genes Genet. Syst. (2016) In press REMARK Publication Status: Available-Online prior to print DOI:10.1266/ggs.15-00062 COMMENT FEATURES Location/Qualifiers source 1..4525 /collected_by="Nariyasu Shimazu" /cultivar="Yakuyou-shirohana" /db_xref="taxon:35883" /mol_type="genomic DNA" /organism="Ipomoea nil" CDS 1837..2712 /allele="ca-3" /codon_start=1 /gene="InWDR1" /note="The ca-3 mutation is the InSto1 insertion in the InWDR1 gene; InWDR1 is a transcriptional regulator" /product="WD40 repeat protein" /protein_id="BAV13624.1" /transl_table=1 /translation="MENSTQGSNLRSENSVTYESPYPIFAMAVSSFAAAHHGLRRRSV AVGSFLEEYKNRVEILSFEEDTVTLKTNPGLAFDHPYPPTKLMFHPNPTASMKSADLL VSSGDYLRLWEVREASIEPVSTLNNSKTSEYCAPLTSFDWNEVEPRRIGTSSIDTTCT IWDIEKGVVETQLIAHDKEVYDIAWGEAGVFSSVSADGSVRIFDLRDKEHSTIIYSLS PVKDVSITFGTQFKTSKKVDSFSIYALVFSDFICYPVLLFQFFFLLFIRLLCYRGIPS SHLQIFFHLSSTNIP" mobile_element 2481..3329 /mobile_element_type="MITE:InSto1" /note="InSto1 is a Stowaway-like transposon in the Tc1/Mariner superfamily" BASE COUNT 1368 a 827 c 889 g 1441 t ORIGIN 1 ggatcccatg catccagtgt ttgtcgtgaa gattgatgat gatgatgatg atgatgatga 61 tgatgagtct aatttcctct attaatttca ccaaaatggc ttttctagtt ttcacagaat 121 ggaataataa agctatctgc accctgcttc tgatcttttc attattgtat acatactaca 181 ctatatattt tgttgccaag tttgaactca ttgtatattt gatcatatca tactttacca 241 ctattactga ttatataata aagaaaatta tgttttcatg aatcatgact tctacttatt 301 tttaattttt attttttggt gactatatgg aaacctgcaa tcactatcat ggccttttgt 361 ttctctacac gtgcaaggct caactaatac attaacgact cgtctgattg gctagaaaat 421 atttaaacgg aaatggattg aaatttcatt gaaaattaaa ttctaaaaaa atagattcca 481 ttgtttggtt agtgaaaaaa aaaatttatt gaaaatatga atctcattgt ttgattttgg 541 aagttaaaga ataatgggtg taaagacaat tataccctac agaataataa tgttaattaa 601 taaaagttga taacgacata attatcctat tttctatgaa aaataaaata cctcaggaga 661 atcatagaaa atgttttcct tatttttaaa gaaatatttt tctgtgaaaa tgttttcatg 721 aaccaaataa aagaaaaagt caatttttct caaattcaag aaaaacattt ttttaaaaaa 781 ataattttca gcaacttaaa attttaccaa ttataataaa acgtgttaag taaaacaaat 841 gtagtccaca cgttttctgc tattttaatt atcttactaa tgaattgtca aaatggcatt 901 agctcaaagt ccatattggt agtaggtgaa actttagcct agccaagaag agtggagaga 961 ggtggagccc atgcatatgg aatcaaggat aagtaattta atcctaatta cttatacaat 1021 accacctaat attttacttt gaataatact aaactttgaa tattaaaaat ctcttaaact 1081 tctaatgtct ttggtctttg attgggaacc agcacatcgt tatcaacttt aaattttttt 1141 ataaaaaatt catcatttaa aattagagct aattaatact aataagtaat tagaaacaaa 1201 ctttaatgtt tattgccctt tttgagtaat ttacactagt tacattttca acgtttcgtt 1261 gcagtcgttt gtgcgggata ttatattatt tactcgtata tattgtaaag tttttaaaaa 1321 tatatcaaat aaaaataaca gtatttacgt gaaaacaatt gtgacagcgt ttaataagag 1381 ttgttatatg ggtggatagc aaatttgcaa tgcattgatg aattacaaga aaagtgagag 1441 agattgggag tgaaatgatg agtctaccaa tttgaatcca ctagggggtg tggtgttatg 1501 agattgaaca ataaggttga aatatgtaat taagtgaaag aacagggtta tgagtgtcat 1561 ttaggatgct tattgggccg cttaacttga tggttagtaa tagaaataag cccagtagat 1621 tccggcccaa gttactgagt caaggcccaa agctgtcaag aatgactggg gcaaaggctg 1681 agtggctgag tcaatcgacg cgttataact tattatcaca tgttcacaat cacacttctc 1741 tctcgggtta tataagccac cggcgagcca acttccggta aaaaaccggc cggcgattca 1801 acgctccgag gaaaaatcaa attttaaccc acaaagatgg agaactcaac ccaaggatcg 1861 aatctcagat ccgagaattc cgtgacctat gagtctccct accccatttt cgccatggcc 1921 gtgtcctcct tcgccgccgc ccaccatggc ctccggcgac gcagcgtcgc cgtcggcagc 1981 ttcctcgaag agtacaaaaa ccgggtcgaa atcctctcct tcgaagaaga taccgtcact 2041 ctgaaaacca acccggggct agccttcgat cacccttacc ctcccacgaa gctcatgttc 2101 catcctaatc ccacggcgtc aatgaagtcc gccgatctcc tagtgtcctc cggcgactac 2161 ctccgtctct gggaggttcg agaagcttcc attgagcccg tttcgaccct caacaatagc 2221 aaaaccagtg aatactgcgc cccattgacc tccttcgatt ggaacgaggt ggagccgcgg 2281 cgaatcggaa cttcaagtat tgataccacc tgtaccatct gggatatcga gaagggcgtt 2341 gtggaaaccc aattgatcgc ccacgataaa gaggtttacg acatagcctg gggggaagcc 2401 ggggttttct cttcggtttc ggctgacggg tcggttcgga tcttcgatct gagagacaaa 2461 gaacactcca caatcatata ctccctcagt cccgtaaagg atgtctcaat tacttttggc 2521 acgcaattta agacaagcaa aaaagtagac tctttttcca tttatgccct tgtgttctct 2581 gactttattt gctacccagt actactcttt caattcttct ttcttctttt cattcgacta 2641 ctttgctaca gaggcattcc ttcatctcat ttgcagatat tttttcatct ttcttcaaca 2701 aatattccat aacctctttg ttttttatta ttctctatac actcagtaat tatacaaaaa 2761 aaaaatacat gaatttaata ctactaaaac ccaccagatc tgcattcaac tataagaata 2821 aatagaaaaa cagaggtagt gatgttcaca gatctgaaag actgttgcca ttaatctgcg 2881 gatgtcgaca aggatgagtg tcgtcatcaa ttcaaggagt aataaaaagc cggcgggaac 2941 atatacaagc agttactaaa aaagatggat gggcattccg aagtgtaaaa aattctgatg 3001 tttcatggat attcgaaggc cggtctcacc aattgaagag acgatgaaag aaaggaagag 3061 tacgaaagat ggttgagggc ttgtgtttgc aaaatggaag tgagtagact agggaagaaa 3121 agtttatttt ttcttattca ctggacacta tttttaaggt ttgggtgtat gacagttggt 3181 gggcactaat aagtgttgag tagttgtagt taaagttaag ggtaaaattg taaaaataaa 3241 aatatattga tgtttatttt tggaaagtgg acaatatttt gggacggaca aaaaaggaaa 3301 gtaagacaga caaaatggga cggagggagt acgagagccc ccaacccgac accccattgc 3361 tcaggctggc ttggaacaag caagatttaa ggtacatggc gacaatatta atggacagta 3421 acaaagttgt aatcttggac atcaggtcac ctgcaatgcc ggtggctgag ctggagaggc 3481 acaatgctag tgtgaacgcc attgcttggg ctcctcagag ctccaggcac atctcttctg 3541 ccggagatga tggccaggcg cttatctggg aattgcccac agttgcaggc ccaaatggga 3601 ttgaccccat gtcaatgtac tcagctgggg ctgagattaa ccagcttcaa tggtctgctg 3661 ctcagcctga ctggattgcc attgcgtttt ctaacaagct tcagatgcta aaagtgtaag 3721 gagatgataa agattgcacc tttactaggt tgtagcagtg gtagttaatg ggttagttat 3781 gtattgttaa gtagtgttgt ttggtatgtg tctgtaattg gttatctgtt aatgggtttg 3841 ttgaatgttg gaacacttgt attactcccc acttgattaa tataatttct tgaatatgat 3901 tatatgttct gtcagtttct gtcattcctt gcttgagcat tgcctaacaa ctcatgtcag 3961 tttctgtcat tccttgcttg agcattgcct aacaactcaa gtgaattgag ccattgctgt 4021 tatttgggaa agtcaatagt aaatgatctg tttatgcttc tcaagtgctt ttgcagaatg 4081 ttgctacatc tgtttcccta tatatatagt tctttttctt ttcttatttt ttgatacatt 4141 aggtttcagt ttatgtcata cttagtcttg tcactatggc ttctgccaac ttggggagtc 4201 caatctccaa tctagggagc ccaagggcct aaactctagc ttggggagtc ctaactctaa 4261 gatgttggtg ggagtcgaac tcctatcttg ccgctagagt gttgacttta ggtcaggtga 4321 tcgaccactt gaaacatgat atatatagtt ctttttcttt tctttaaagg gtggctttca 4381 tgtcaaaaag taaggtgctt gagtaggtta taggtggaat ctggtgcttc aactcttatt 4441 ttgctgtagc cattatctgc ataaaatttt ctttctactg ttgtgatgtt ctgtttgttc 4501 tttttagaca gtccacctcc cagta //