LOCUS       JN003285                 804 bp    DNA     linear   VRT 25-JUL-2016
DEFINITION  Abbottina rivularis isolate CTOL00097 opsin (RH1) gene, partial
            cds.
ACCESSION   JN003285
VERSION     JN003285.1
KEYWORDS    .
SOURCE      Abbottina rivularis (Chinese false gudgeon)
  ORGANISM  Abbottina rivularis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
            Cypriniformes; Gobionidae; Gobioninae; Abbottina.
REFERENCE   1  (bases 1 to 804)
  AUTHORS   Tang,K.L., Agnew,M.K., Chen,W.J., Vincent Hirt,M., Raley,M.E.,
            Sado,T., Schneider,L.M., Yang,L., Bart,H.L., He,S., Liu,H.,
            Miya,M., Saitoh,K., Simons,A.M., Wood,R.M. and Mayden,R.L.
  TITLE     Phylogeny of the gudgeons (Teleostei: Cyprinidae: Gobioninae)
  JOURNAL   Mol. Phylogenet. Evol. 61 (1), 103-124 (2011)
   PUBMED   21672635
REFERENCE   2  (bases 1 to 804)
  AUTHORS   Tang,K.L., Agnew,M.K., Chen,W.-J., Raley,M.E., Sado,T.,
            Schneider,L.M., Yang,L., Bart,H.L., He,S., Liu,H., Miya,M.,
            Saitoh,K., Simons,A.M., Wood,R.M. and Mayden,R.L.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-MAY-2011) Biology, Saint Louis University, 3507
            Laclede Ave, St. Louis, MO 63103, USA
FEATURES             Location/Qualifiers
     source          1..804
                     /organism="Abbottina rivularis"
                     /mol_type="genomic DNA"
                     /isolate="CTOL00097"
                     /db_xref="taxon:75332"
     gene            <1..>804
                     /gene="RH1"
     mRNA            <1..>804
                     /gene="RH1"
                     /product="opsin"
     CDS             <1..>804
                     /gene="RH1"
                     /codon_start=1
                     /product="opsin"
                     /protein_id="AEJ07792.1"
                     /translation="FACLAAYMFFLIITGFPVNFLTLYVTLEHKKLRTPLNYILLNLA
                     VADLFMVFGGFTTTMYTSLHGYFVFGRLGCNLEGFFATLGGEMALWSIVTLAIERWLV
                     VCKPISNFRFGENHAIMGVVFTWVMACSCAVPPLVGWSRYIPEGMQCSCGVDYYTRAE
                     GYNNESFVIYMFLVHALIPFCVIFFCYGRLVCTVKEAAAQQQESETTQRAEREVTRMV
                     VLMGFAYLVCWLPYASVAWYIFTHKGTEFGPIFMTIPAFFAKTSAVYNPV"
BASE COUNT          138 a          253 c          191 g          222 t
ORIGIN      
        1 tttgcctgcc tggctgctta catgttcttc ctcattatca ccggcttccc cgtcaatttc
       61 ctcactctgt atgtcaccct cgagcacaag aagctgcgta cacctctcaa ctacatcctg
      121 ctgaatcttg ctgttgccga tctcttcatg gtgttcggag gcttcaccac gacaatgtac
      181 acctctttgc acggctactt cgtgttcgga cgtctgggct gcaacctcga aggcttcttt
      241 gcaacccttg gtggtgaaat ggccctttgg tccattgtca cgctggccat tgagaggtgg
      301 ctggtcgtct gtaagcccat cagcaacttc cgcttcggtg agaaccacgc catcatgggt
      361 gtcgtcttca catgggtcat ggcctgctcc tgcgccgtgc ctccccttgt cggttggtcc
      421 cgttacatcc ctgagggcat gcagtgctca tgcggagtcg actattacac tcgcgccgag
      481 ggctacaaca acgagtcctt cgtcatctac atgtttcttg tccacgccct gattcccttc
      541 tgtgtcattt tcttctgtta cggtcgtctg gtctgcacgg tcaaagaagc tgctgcccag
      601 cagcaggagt ccgagaccac acagagggct gagcgcgagg tcacccgcat ggtcgtcctc
      661 atgggcttcg cctacttggt ttgttggctc ccctacgcca gtgtggcctg gtacatcttc
      721 acccacaagg gaaccgaatt cgggcctatc ttcatgacaa ttccagcctt ctttgccaag
      781 acctctgctg tctacaaccc agtc
//