LOCUS       HM223947                 792 bp    DNA     linear   VRT 25-JUL-2016
DEFINITION  Pseudorasbora parva isolate CTOL00478 rhodopsin gene, partial cds.
ACCESSION   HM223947
VERSION     HM223947.1
KEYWORDS    .
SOURCE      Pseudorasbora parva (stone moroko)
  ORGANISM  Pseudorasbora parva
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
            Cypriniformes; Gobionidae; Sarcocheilichthyinae; Pseudorasbora.
REFERENCE   1  (bases 1 to 792)
  AUTHORS   Tang,K.L., Agnew,M.K., Hirt,M.V., Sado,T., Schneider,L.M.,
            Freyhof,J., Sulaiman,Z., Swartz,E., Vidthayanon,C., Miya,M.,
            Saitoh,K., Simons,A.M., Wood,R.M. and Mayden,R.L.
  TITLE     Systematics of the subfamily Danioninae (Teleostei: Cypriniformes:
            Cyprinidae)
  JOURNAL   Mol. Phylogenet. Evol. 57 (1), 189-214 (2010)
   PUBMED   20553898
REFERENCE   2  (bases 1 to 792)
  AUTHORS   Tang,K.L., Agnew,M.K., Chen,W.J., Hirt,M.V., Sado,T.,
            Schneider,L.M., Freyhof,J., Sulaiman,Z., Swartz,E., Vidthayanon,C.,
            Miya,M., Saitoh,K., Simons,A.M., Wood,R.M. and Mayden,R.L.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAY-2010) Biology, Saint Louis University, 3507
            Laclede Ave, St. Louis, MO 63108, USA
FEATURES             Location/Qualifiers
     source          1..792
                     /organism="Pseudorasbora parva"
                     /mol_type="genomic DNA"
                     /isolate="CTOL00478"
                     /db_xref="taxon:51549"
     mRNA            <1..>792
                     /product="rhodopsin"
     CDS             <1..>792
                     /codon_start=1
                     /product="rhodopsin"
                     /protein_id="ADJ56005.1"
                     /translation="AAYMFFLIITGFPVNFLTLYVTLEHKKLRTPLNYILLNLAVADL
                     FMVFGGFTTTMYTSLHGYFVFGRLGCNLEGFFATLGGEMALWSIVTLAIERWLVVCKP
                     ISNFRFGENHAIMGVVFTWVMACSCAVPPLLGWSRYIPEGMQCSCGVDYYTRAEGYNN
                     EAFVIYMFIVHATIPFCVIFFCYGRLVCTVKEAAAQQQESETTQRAEREVTRMVVLMG
                     FAYLVCWLPYASVAWYIFTHKGADFGPIFMTIPAFFAKTSAVYNPV"
BASE COUNT          146 a          244 c          191 g          211 t
ORIGIN      
        1 gctgcttaca tgttctttct cattatcacc ggcttccccg tcaatttcct cactctgtat
       61 gtgaccctgg agcacaagaa gctgcgcacc ccactcaact acatcctgct gaatctggcc
      121 gtggccgatc tcttcatggt gtttggcggc ttcaccacga ccatgtacac ttcgttgcac
      181 ggctacttcg tgtttggacg cctcggatgc aaccttgagg gcttcttcgc aaccctgggt
      241 ggtgaaatgg cgctttggtc cattgtcacg ctggccattg agagatggct ggtcgtctgt
      301 aagcccatca gcaacttccg cttcggggag aaccacgcca tcatgggtgt agtcttcaca
      361 tgggtcatgg cttgctcctg cgcagttcca cctcttctgg gctggtctcg ctacatcccc
      421 gaaggcatgc aatgctcatg cggagtcgac tattacactc gcgccgaggg ctacaacaat
      481 gaggccttcg tcatctacat gttcattgtc catgccacca ttcccttctg tgtcatcttc
      541 ttctgctacg gtcgcctggt ttgcactgtg aaagaagcag ctgcccagca acaggagtcc
      601 gaaaccacac agagggctga gcgcgaagtc acccgcatgg tcgtcctcat gggcttcgcc
      661 tacttggtgt gttggctccc ctatgccagt gtggcctggt acatcttcac ccacaaggga
      721 gctgattttg ggcctatctt catgacaatt ccagccttct ttgccaagac ctccgccgtc
      781 tacaatccag tc
//