LOCUS       FJ197043                 815 bp    DNA     linear   VRT 26-JUL-2016
DEFINITION  Rhodeus ocellatus kurumeus isolate CTOL00544 rhodopsin (RH) gene,
            partial cds.
ACCESSION   FJ197043
VERSION     FJ197043.1
KEYWORDS    .
SOURCE      Rhodeus ocellatus kurumeus (Japanese rosy bitterling)
  ORGANISM  Rhodeus ocellatus kurumeus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
            Cypriniformes; Acheilognathidae; Rhodeus.
REFERENCE   1  (bases 1 to 815)
  AUTHORS   Mayden,R.L., Chen,W.J., Bart,H.L., Doosey,M.H., Simons,A.M.,
            Tang,K.L., Wood,R.M., Agnew,M.K., Yang,L., Hirt,M.V.,
            Clements,M.D., Saitoh,K., Sado,T., Miya,M. and Nishida,M.
  TITLE     Reconstructing the phylogenetic relationships of the earth's most
            diverse clade of freshwater fishes--order Cypriniformes
            (Actinopterygii: Ostariophysi): a case study using multiple nuclear
            loci and the mitochondrial genome
  JOURNAL   Mol. Phylogenet. Evol. 51 (3), 500-514 (2009)
   PUBMED   19141325
REFERENCE   2  (bases 1 to 815)
  AUTHORS   Chen,W.-J. and Agnew,M.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-SEP-2008) Department of Biology, Saint Louis
            University, 3507 Laclede Avenue, Saint Louis, MO 63103, USA
FEATURES             Location/Qualifiers
     source          1..815
                     /organism="Rhodeus ocellatus kurumeus"
                     /mol_type="genomic DNA"
                     /isolate="CTOL00544"
                     /sub_species="kurumeus"
                     /db_xref="taxon:80800"
     gene            <1..>815
                     /gene="RH"
     mRNA            <1..>815
                     /gene="RH"
                     /product="rhodopsin"
     CDS             <1..>815
                     /gene="RH"
                     /codon_start=1
                     /product="rhodopsin"
                     /protein_id="ACJ83139.1"
                     /translation="QYYLVEPWAFALLAAYMFFLIITGFPVNFLTLYVTIEHKKLRTP
                     LNYILLNLAVADLFMVFGGFTTTMYTSLHGYFVFGRLGCNLEGFFATLGGEMALWSIV
                     TLAIERWLVVCKPIANFRFGENHAIMGVVFTWVMACSCAVPPLVGWSRYIPEGMQCSC
                     GVDYYTRAEGYNNESFVIYMFLVHALIPFVVIFFCYGRLVCTVKEAAAQQQESETTQR
                     AEREVTRMVVLMGFAYLVCWSPYASVAWYIFTHKGTAFGPVFMTIPAFFAKTSA"
BASE COUNT          136 a          256 c          204 g          217 t
ORIGIN      
        1 cagtactacc tggtggagcc atgggcattt gccctcctgg ctgcttacat gttctttctc
       61 attatcaccg gcttccccgt caatttcctc actctgtatg tcaccatcga gcacaagaag
      121 ctgcgtacac ccctcaacta cattctgctg aacctcgccg ttgccgatct cttcatggtg
      181 ttcggtggat tcaccacaac gatgtacacc tcgttgcacg gctacttcgt gttcgggcgc
      241 ctcggctgca acctcgaagg cttctttgcc accctgggtg gtgaaatggc gctttggtcc
      301 atcgtcacgc tggccattga gaggtggctc gtggtttgca agcccatcgc caacttccgc
      361 ttcggggaga accacgccat catgggggtc gtcttcacat gggtcatggc ttgctcctgc
      421 gccgtgcctc ccctggtcgg ctggtcccgt tacatccccg agggcatgca gtgctcctgc
      481 ggagtcgact attacactcg tgctgagggc tacaacaacg agtccttcgt catytacatg
      541 tttcttgtcc acgctctcat tccgttcgtt gttatattct tytgctatgg ccgtctggtc
      601 tgcactgtca aagaagccgc tgcccagcag caggagtccg agaccaccca gagggctgag
      661 cgcgaggtca cccgcatggt cgtcctcatg ggcttcgcct acttggtttg ttggtcgccc
      721 tatgctagcg tggcctggta catcttcacc cacaagggaa ccgcatttgg gcctgtcttc
      781 atgacaatac cagccttctt tgccaagacc tctgc
//