LOCUS       FJ197042                 831 bp    DNA     linear   VRT 26-JUL-2016
DEFINITION  Acheilognathus typus isolate CTOL00269 rhodopsin (RH) gene, partial
            cds.
ACCESSION   FJ197042
VERSION     FJ197042.1
KEYWORDS    .
SOURCE      Acheilognathus typus (zenitanago)
  ORGANISM  Acheilognathus typus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
            Cypriniformes; Acheilognathidae; Acheilognathus.
REFERENCE   1  (bases 1 to 831)
  AUTHORS   Mayden,R.L., Chen,W.J., Bart,H.L., Doosey,M.H., Simons,A.M.,
            Tang,K.L., Wood,R.M., Agnew,M.K., Yang,L., Hirt,M.V.,
            Clements,M.D., Saitoh,K., Sado,T., Miya,M. and Nishida,M.
  TITLE     Reconstructing the phylogenetic relationships of the earth's most
            diverse clade of freshwater fishes--order Cypriniformes
            (Actinopterygii: Ostariophysi): a case study using multiple nuclear
            loci and the mitochondrial genome
  JOURNAL   Mol. Phylogenet. Evol. 51 (3), 500-514 (2009)
   PUBMED   19141325
REFERENCE   2  (bases 1 to 831)
  AUTHORS   Chen,W.-J. and Agnew,M.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-SEP-2008) Department of Biology, Saint Louis
            University, 3507 Laclede Avenue, Saint Louis, MO 63103, USA
FEATURES             Location/Qualifiers
     source          1..831
                     /organism="Acheilognathus typus"
                     /mol_type="genomic DNA"
                     /isolate="CTOL00269"
                     /db_xref="taxon:80789"
     gene            <1..>831
                     /gene="RH"
     mRNA            <1..>831
                     /gene="RH"
                     /product="rhodopsin"
     CDS             <1..>831
                     /gene="RH"
                     /codon_start=1
                     /product="rhodopsin"
                     /protein_id="ACJ83138.1"
                     /translation="QYYLAEPWAFALLAAYMFFLIITGFPVNFLTLYVTLEHKKLRTP
                     LNYILLNLAVADLFMVFGGFTTTMYTSLHGYFVFGRLGCNLEGFFATLGGEMALWSIV
                     TLAIERWLVVCKPISNFRFGENHAIMGVVFTWVMACSCAVPPLLGWSRYIPEGMQCSC
                     GVDYYTRAEGYNNESFVIYMFLVHALIPFVVIFFCYGRLVCTVKEAAAQQQESETTQR
                     AEREVTRMVVLMGFAYLVCWLPYASVAWYIFTHKGTAFGPIFMTIPAFFAKTSAVYNP
                     V"
BASE COUNT          143 a          252 c          204 g          232 t
ORIGIN      
        1 cagtactacc tggcggagcc atgggcattt gccctcctgg ctgcttacat gttctttctc
       61 attatcaccg gcttccccgt caatttcctc actctgtatg tcaccctcga gcacaagaag
      121 ctgcggacac cccttaacta cattctgctg aacctcgccg ttgctgacct cttcatggtg
      181 ttcggtggtt tcaccacaac gatgtacacc tcgttgcacg gctacttcgt gtttggacgc
      241 ctcggctgca accttgaagg cttcttcgca accctgggtg gtgaaatggc gctttggtcc
      301 attgtcacgc tggccattga gaggtggctt gtggtttgta agcccatcag caacttccgc
      361 tttggagaga accatgccat catgggagtc gtgttcacgt gggtcatggc ttgctcctgc
      421 gccgtacctc cccttcttgg ctggtcccgt tacatccctg agggcatgca gtgctcatgc
      481 ggagtcgact attacactcg cgctgagggc tacaacaacg agtccttcgt catctacatg
      541 tttcttgtcc acgccctcat tccgttcgtt gttattttct tctgctatgg ccgtctagtc
      601 tgcactgtca aggaagccgc tgcccagcag caggagtctg agaccaccca gagggctgag
      661 cgcgaggtca cccgcatggt cgtcctcatg ggcttcgcct acttggtttg ttggctgccg
      721 tatgctagtg tggcctggta tatcttcacc cacaagggaa ccgcatttgg gccaatcttc
      781 atgacaattc cagccttctt tgccaagacc tctgctgtct acaacccggt c
//