LOCUS       EU711157                1482 bp    DNA     linear   VRT 26-JUL-2016
DEFINITION  Sarcocheilichthys variegatus microoculus isolate CTOL00557
            recombination activating protein 1 (RAG1) gene, exon 3 and partial
            cds.
ACCESSION   EU711157
VERSION     EU711157.1
KEYWORDS    .
SOURCE      Sarcocheilichthys variegatus microoculus
  ORGANISM  Sarcocheilichthys variegatus microoculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
            Cypriniformes; Gobionidae; Sarcocheilichthyinae; Sarcocheilichthys.
REFERENCE   1  (bases 1 to 1482)
  AUTHORS   Mayden,R.L., Tang,K.L., Wood,R.M., Chen,W.-J., Agnew,M.K.,
            Conway,K.W., Yang,L., Simons,A.M., Bart,H.L., Harris,P.M., Li,J.,
            Wang,X., Saitoh,K., He,S., Liu,H., Chen,Y., Nishida,M. and Miya,M.
  TITLE     Inferring the Tree of Life of the order Cypriniformes, the earth's
            most diverse clade of freshwater fishes: Implications of varied
            taxon and character sampling
  JOURNAL   J Syst Evol 46 (3), 424-438 (2008)
REFERENCE   2  (bases 1 to 1482)
  AUTHORS   Chen,W.-J., Agnew,M.K. and Tang,K.L.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-MAY-2008) Biology, Saint Louis University, 3507
            Laclede Ave, Saint Louis, MO 63103-2010, USA
FEATURES             Location/Qualifiers
     source          1..1482
                     /organism="Sarcocheilichthys variegatus microoculus"
                     /mol_type="genomic DNA"
                     /isolate="CTOL00557"
                     /sub_species="microoculus"
                     /db_xref="taxon:149978"
     gene            <1..>1482
                     /gene="RAG1"
     mRNA            <1..>1482
                     /gene="RAG1"
                     /product="recombination activating protein 1"
     CDS             <1..>1482
                     /gene="RAG1"
                     /codon_start=1
                     /product="recombination activating protein 1"
                     /protein_id="ACG70247.1"
                     /translation="FQPLHTLRNAEKELLPGFHQFEWQPALKNVCSSWDVGIIDGLSG
                     WTSSVDDVPADTIARRFRYDVALVSALKDLEEDIMEGLRERGLDDIMCTSGFTVVVKE
                     SCDGMGDVSEKHGTGPAVPEKAVRFSFTIMSISIRVEGEDDGITIFQEQKPNSELSCR
                     PLCLMFVDESDHETLTAILGPVVAERKAMMESRLILSVGGLLRSFRFFFRGTGYDEKM
                     VREMEGLEASGSTYICTLCDSTRAEASQNMVLHSITRSHNENLERYEIWRKNPFSESA
                     DELRDRVKGVSAKPFMETQPTLDALHCDIGNATEFYKIFQDEIGEVYQRSNPSREERR
                     RWRSTLDKQLRKKLKLKPVMRMNGNYARRLMTREAVEVVCELVPSEERREALQRLMEL
                     YLQMKPVWRSTCPSRDCPDQLCRYSYNSQQFADLLSTTFKYRYDGKITNYLHKTLAHV
                     PEIVERDGSIGAWASEGNESGNKLFRRFRKMNARQSKMFELEDV"
     exon            <1..>1482
                     /gene="RAG1"
                     /number=3
BASE COUNT          386 a          347 c          391 g          358 t
ORIGIN      
        1 ttccagcccc tgcacactct acgtaatgct gagaaagagc ttctccccgg gttccaccaa
       61 tttgaatggc agccagcttt aaaaaatgtc tgcagctcct gggatgtggg catcattgat
      121 ggcctttctg gttggacatc ctctgttgat gatgtccctg cggacaccat cgccagacga
      181 ttccgctacg atgtggcact ggtttctgca ttaaaagacc tggaggaaga cataatggaa
      241 ggactaagag agagggggct agatgacatc atgtgcacct ctggctttac tgtggtggtg
      301 aaagaatcct gtgatggaat gggagacgtc agtgagaagc atggaactgg tccagcggtt
      361 cctgagaagg cagtgaggtt ttccttcaca atcatgtcca tctccatccg agttgagggt
      421 gaggacgatg gcatcaccat cttccaggaa caaaagccaa actctgagct ctcttgtaga
      481 cctttgtgcc tcatgtttgt ggatgagtcc gaccacgaga ccctgacagc aattttggga
      541 cctgtggtag cagagcggaa agccatgatg gaaagccgac ttatcctatc tgttggtggt
      601 ctgctacgct catttaggtt cttcttccgg ggcacaggct atgatgagaa gatggttcgt
      661 gaaatggaag ggctcgaagc atcaggctct acttatatat gcacactctg cgactcaacc
      721 cgagctgaag cctcacaaaa catggtgcta cattccatca cacgtagcca caatgaaaat
      781 cttgagcgct acgagatctg gaggaaaaat cctttctcag agtctgcaga tgaacttcgt
      841 gaccgggtca aaggtgtttc tgccaagcct ttcatggaga cccagcctac tctggatgcc
      901 ctgcactgtg acattggcaa tgcgactgaa ttctacaaga tctttcagga tgagatcggc
      961 gaagtctacc agaggagcaa tccgagtcga gaggaacgcc gtcgttggcg gtcaaccctg
     1021 gacaaacagc taagaaagaa actgaaactc aagcctgtga tgaggatgaa tggaaactat
     1081 gcacgtaggc tgatgacacg tgaggctgtg gaggtggtct gtgagctggt tccttccgag
     1141 gaacgacgtg aggcactaca gagactgatg gaactctacc ttcagatgaa gcctgtgtgg
     1201 cgttcaacct gtccctcccg agactgccct gaccaacttt gccgatatag ctacaactct
     1261 cagcaatttg ctgacctcct ttctaccacg tttaagtacc gctatgatgg aaaaattacc
     1321 aactaccttc acaagactct ggcccatgtt cctgagattg ttgagagaga tgggtctatc
     1381 ggagcatggg ccagtgaagg caatgagtct gggaacaagc tgttcagacg ttttcggaag
     1441 atgaatgcaa ggcagtccaa aatgtttgaa cttgaagatg ta
//