LOCUS       EU711142                1479 bp    DNA     linear   VRT 26-JUL-2016
DEFINITION  Rhodeus ocellatus kurumeus isolate CTOL00544 recombination
            activating protein 1 (RAG1) gene, exon 3 and partial cds.
ACCESSION   EU711142
VERSION     EU711142.1
KEYWORDS    .
SOURCE      Rhodeus ocellatus kurumeus (Japanese rosy bitterling)
  ORGANISM  Rhodeus ocellatus kurumeus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
            Cypriniformes; Acheilognathidae; Rhodeus.
REFERENCE   1  (bases 1 to 1479)
  AUTHORS   Mayden,R.L., Tang,K.L., Wood,R.M., Chen,W.-J., Agnew,M.K.,
            Conway,K.W., Yang,L., Simons,A.M., Bart,H.L., Harris,P.M., Li,J.,
            Wang,X., Saitoh,K., He,S., Liu,H., Chen,Y., Nishida,M. and Miya,M.
  TITLE     Inferring the Tree of Life of the order Cypriniformes, the earth's
            most diverse clade of freshwater fishes: Implications of varied
            taxon and character sampling
  JOURNAL   J Syst Evol 46 (3), 424-438 (2008)
REFERENCE   2  (bases 1 to 1479)
  AUTHORS   Chen,W.-J., Agnew,M.K. and Tang,K.L.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-MAY-2008) Biology, Saint Louis University, 3507
            Laclede Ave, Saint Louis, MO 63103-2010, USA
FEATURES             Location/Qualifiers
     source          1..1479
                     /organism="Rhodeus ocellatus kurumeus"
                     /mol_type="genomic DNA"
                     /isolate="CTOL00544"
                     /sub_species="kurumeus"
                     /db_xref="taxon:80800"
     gene            <1..>1479
                     /gene="RAG1"
     mRNA            <1..>1479
                     /gene="RAG1"
                     /product="recombination activating protein 1"
     CDS             <1..>1479
                     /gene="RAG1"
                     /codon_start=1
                     /product="recombination activating protein 1"
                     /protein_id="ACG70232.1"
                     /translation="FXPLHTLRNAEKELLPGFHQFEWQPALKNVSSSWDVGIIDGLSG
                     WTTSVDDVPAETISRRFRYDVALVSALKDLEEDIMEGLRERGLDDSICTSGFTVVVKE
                     SCDGMGDVGEKHGSGPAVPEKAVRFSFTIMSISIRIEDEDDGITIFQEPKPNSELSCR
                     PLCLMFVDESDHETLTAILGPVVAERKAMMESRLIVSVGGLLRSFRFFFRGTGYDEKM
                     VREMEGLEASGSTYICTLCDSTRAEASQNMVLHSITRSHDENLERYEIWRTNPFSEST
                     DELRDRVKGVSAKPFMEIQPTLDALHCDIGNATEFYKIFQDEIGEVYQRSNPTREERR
                     RWRSTLDKQLRNKLKLKPVMRMNGNYARRLMTREAVDVVCELVPSEERREALQRLMEL
                     YLQMKPVWRSTCPSRDCPDQLCRYSYNSQQFADLLSTTFKYRYDGKITNYLHKTLAHV
                     PEIVERDGSIGAWASEGNESGNKLFRRFRKMNARQSKTFELED"
     exon            <1..>1479
                     /gene="RAG1"
                     /number=3
BASE COUNT          382 a          353 c          393 g          350 t
ORIGIN      
        1 ttccngcccc tgcacactct acgcaacgct gagaaagagc ttctccccgg gtttcaccaa
       61 tttgaatggc agccagcttt aaaaaacgtt tccagctcct gggatgtggg catcattgat
      121 ggcctctctg gttggaccac ctctgttgat gatgtcccag cggagaccat ctccagacga
      181 ttccgctacg atgtggcact ggtttctgca ttaaaagacc tggaggaaga cataatggaa
      241 ggattgagag agaggggact ggatgacagc atatgcacct ctggctttac tgtggtggtg
      301 aaagaatcat gtgatggtat gggagatgtc ggcgagaagc atggaagtgg tccagcggtt
      361 cctgagaagg cagtgaggtt ttccttcaca atcatgtcta tctccatccg aatcgaggat
      421 gaggatgatg gcatcaccat cttccaggaa ccaaagccaa actctgagct ctcttgtaga
      481 cctttgtgcc tcatgtttgt ggatgagtct gatcacgaga ccctgacggc aatcttggga
      541 cctgtggtcg cagaacggaa ggccatgatg gaaagtcgac ttatcgtatc tgttggtggc
      601 ctgctgcgct catttcggtt cttcttcagg ggcacaggct atgatgagaa gatggttcgt
      661 gaaatggaag ggctggaagc atcaggctcc acttacatat gcacactctg cgactcaacc
      721 cgagctgaag cctctcaaaa catggtgctt cattccatca cacgtagcca cgatgaaaat
      781 ctggagcgct acgagatctg gaggacaaat cctttctcag agtccaccga tgaactccgt
      841 gaccgggtca aaggtgtgtc tgccaagcct tttatggaga tccagcctac tctggatgcc
      901 ctgcactgcg acattggcaa tgcgactgaa ttctacaaga tttttcagga cgagatcggc
      961 gaagtctacc agagaagcaa tccgacaaga gaggaacgcc gtcgttggcg gtcaaccctg
     1021 gacaaacagc taagaaataa actgaagctc aagccagtga tgaggatgaa tggaaactat
     1081 gcgcgtcgac taatgacacg tgaggcagtg gacgtggtct gtgagctggt cccctccgag
     1141 gagcgacgtg aggcactaca gagactgatg gagctctacc tccagatgaa gcctgtgtgg
     1201 cgttcaacct gtccttccag agactgtcct gaccaactct gtcgatatag ctacaactct
     1261 cagcagtttg ctgacctcct ttctaccaca tttaagtacc gttatgatgg aaaaattacc
     1321 aactacctcc acaagactct ggctcatgtt cctgagattg ttgagagaga cgggtctatc
     1381 ggagcatggg ccagtgaagg caatgagtct gggaacaagc tgttcagacg ttttcggaag
     1441 atgaatgcaa ggcagtccaa aacatttgaa cttgaagat
//