LOCUS       EU711102                1497 bp    DNA     linear   VRT 13-AUG-2008
DEFINITION  Abbottina rivularis isolate CTOL00097 recombination activating
            protein 1 (RAG1) gene, exon 3 and partial cds.
ACCESSION   EU711102
VERSION     EU711102.1
KEYWORDS    .
SOURCE      Abbottina rivularis (Chinese false gudgeon)
  ORGANISM  Abbottina rivularis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
            Cypriniformes; Gobionidae; Gobioninae; Abbottina.
REFERENCE   1  (bases 1 to 1497)
  AUTHORS   Mayden,R.L., Tang,K.L., Wood,R.M., Chen,W.-J., Agnew,M.K.,
            Conway,K.W., Yang,L., Simons,A.M., Bart,H.L., Harris,P.M., Li,J.,
            Wang,X., Saitoh,K., He,S., Liu,H., Chen,Y., Nishida,M. and Miya,M.
  TITLE     Inferring the Tree of Life of the order Cypriniformes, the earth's
            most diverse clade of freshwater fishes: Implications of varied
            taxon and character sampling
  JOURNAL   J Syst Evol 46 (3), 424-438 (2008)
REFERENCE   2  (bases 1 to 1497)
  AUTHORS   Chen,W.-J., Agnew,M.K. and Tang,K.L.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-MAY-2008) Biology, Saint Louis University, 3507
            Laclede Ave, Saint Louis, MO 63103-2010, USA
FEATURES             Location/Qualifiers
     source          1..1497
                     /organism="Abbottina rivularis"
                     /mol_type="genomic DNA"
                     /isolate="CTOL00097"
                     /db_xref="taxon:75332"
     gene            <1..>1497
                     /gene="RAG1"
     mRNA            <1..>1497
                     /gene="RAG1"
                     /product="recombination activating protein 1"
     CDS             <1..>1497
                     /gene="RAG1"
                     /codon_start=1
                     /product="recombination activating protein 1"
                     /protein_id="ACG68569.1"
                     /translation="QIFQPLHTLRNAEKELLPGFHQFEWQPALKNVCSSWDVGIIDGL
                     SGWTTSVDDVPADTIARRFRYDVALVSALKDLEEDIMEGLRERGLDDSMCTSGFTVVV
                     KESCDGMGDVSEKHGTGPAVPEKAVRFSFTIMSISIRVEGEDDGITIFQEQKPNSELS
                     CRPLCLMFVDESDHETLTAILGPVVAERKAMMESRLIVSVGGLLRSFRFSFRGTGYDE
                     KMVREMEGLEASGSTYVCTLCDSTRAEASQNMVLHSITRSHDENLERYEIWRKNPFSE
                     SADELRDRVKGVSAKPFMETQPTLDALHCDIGNATEFYKIFQDEIGEVYQRSNPSREE
                     RRRWRSTLDKQLRKKLKLKPVMRMNGNYARRLMTREAVEVVCELVPSEERREALQKLM
                     ELYLQMKPVWRSTCPSRDCPDQLCRYSYNSQQFADLLSTTFKYRYDGKITNYLHKTLA
                     HVPEIVERDGSIGAWASEGNESGNKLFRRFRKMNARQSKMFELEDVLKH"
     exon            <1..>1497
                     /gene="RAG1"
                     /number=3
BASE COUNT          388 a          356 c          398 g          349 t
ORIGIN      
        1 cagatattcc agcccctgca cactctacga aatgctgaga aagagcttct ccccgggttt
       61 caccaatttg aatggcagcc agctttaaaa aacgtttgca gctcttggga tgtgggcatc
      121 attgatggcc tctctggttg gacaacatct gttgatgatg tccctgcgga caccatcgcc
      181 aggcgattcc gctaygatgt ggcactggtt tctgcattaa aagacctgga ggaggacata
      241 atggaaggcc tragagagag ggggctagat gatagcatgt gcacctctgg ctttacggtg
      301 gttgtgaaag aatcctgyga tggaatggga gatgtcagtg agaagcatgg aactggtcca
      361 gcggttcctg agaaggcagt gaggttttcc ttcacaatca tgtccatctc catccgagtt
      421 gagggggagg acgatggcat caccatcttc caggaacaaa agccaaactc tgagctctct
      481 tgtagacctt tgtgcctcat gtttgtggat gagtcygacc acgagaccct gacagcaatc
      541 ttgggacctg tggtagcaga gcggaaagcg atgatggaaa gccgacttat cgtatctgtt
      601 ggtggtctgc tccgctcatt taggttctcc ttccggggta caggctatga tgagaagatg
      661 gttcgtgaaa tggaagggct cgaagcatca ggctccactt atgtatgcac actctgcgac
      721 tcaacccgag ctgaagcctc gcaaaacatg gtgctacatt ccatcacacg tagccacgat
      781 gaaaatcttg aacgctacga gatctggagg aaaaatcctt tctctgagtc cgccgatgaa
      841 ctccgtgacc gggtcaaagg tgtttccgcc aagcctttca tggagaccca gcctactctg
      901 gatgccctgc actgtgacat tggcaatgcg acrgaattct acaagatctt tcaggatgag
      961 atcggcgaag tctaccagag gagcaatccg agtcgagagg aacgccgtcg ttggcggtca
     1021 accctggaca aacagctaag aaagaaactg aaactcaagc ctgtgatgag gatgaatgga
     1081 aactatgcac ggcggctgat gacacgtgag gctgtggaag ttgtctgtga gctggttcct
     1141 tctgaggaac gacgtgaggc cctacagaaa ctgatggaac tctacctcca gatgaagcct
     1201 gtgtggcgtt caacctgtcc ctcccgagac tgccctgacc aactctgccg atatagctac
     1261 aactctcagc aatttgctga cctcctttcc accacgttta agtaycgtta tgatgggaaa
     1321 attaccaact acctccacaa gactctggcc catgttcctg agattgttga gagagacggg
     1381 tctatcggag catgggccag tgaaggcaat gagtccggaa acaagctgtt cagacgtttt
     1441 cggaagatga atgcaagaca gtccaaaatg tttgaacttg aagatgtact gaaacac
//