LOCUS       EU409648                 819 bp    DNA     linear   VRT 26-JUL-2016
DEFINITION  Ischikauia steenackeri rhodopsin (RH) gene, partial cds.
ACCESSION   EU409648
VERSION     EU409648.1
KEYWORDS    .
SOURCE      Ischikauia steenackeri
  ORGANISM  Ischikauia steenackeri
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
            Cypriniformes; Xenocyprididae; Xenocypridinae; Ischikauia.
REFERENCE   1  (bases 1 to 819)
  AUTHORS   Chen,W.J., Miya,M., Saitoh,K. and Mayden,R.L.
  TITLE     Phylogenetic utility of two existing and four novel nuclear gene
            loci in reconstructing Tree of Life of ray-finned fishes: The order
            Cypriniformes (Ostariophysi) as a case study
  JOURNAL   Gene 423 (2), 125-134 (2008)
   PUBMED   18703121
REFERENCE   2  (bases 1 to 819)
  AUTHORS   Chen,W.-J.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JAN-2008) Department of Biology, Saint Louis
            University, 3507 Laclede Ave., Saint Louis, MO 63103-2010, USA
FEATURES             Location/Qualifiers
     source          1..819
                     /organism="Ischikauia steenackeri"
                     /mol_type="genomic DNA"
                     /isolate="CTOL00397"
                     /specimen_voucher="UAIC 13123.01"
                     /db_xref="taxon:180933"
     gene            <1..>819
                     /gene="RH"
     mRNA            <1..>819
                     /gene="RH"
                     /product="rhodopsin"
     CDS             <1..>819
                     /gene="RH"
                     /codon_start=1
                     /product="rhodopsin"
                     /protein_id="ACB70088.1"
                     /translation="AEPWAFACLAAYMFFLIITGFPINFLTLYVTLEHKKLRTPLNYS
                     LLNLAVADLFMVFGGFTTTMYTSLHGYFVFGRLGCNLEGFFATLGGEMALWSIVTLAI
                     ERWLVVCKPISNFRFGENHAIIGVVFTWIMACSCAVPPLLGWSRYIPEGMQCSCGIDY
                     YTRAEGFNNESFVIYMFLVHALIPFVVIFFCYGRLVCAVKDAAAQQQESETTQRAERE
                     VTRMVILMGFAYLVCWTPYASTAWYIFTHKGSSFGPIFMTIPAFFAKTSAVYNPV"
BASE COUNT          143 a          270 c          195 g          211 t
ORIGIN      
        1 gcagaaccat gggcgtttgc ctgcctggcc gcttacatgt tcttcctcat tatcaccggc
       61 ttccccatca atttcctcac tctgtatgtc accctcgagc acaagaagct gcgtacaccc
      121 ctcaactaca gtctgctgaa cctcgccgtt gccgacctct tcatggtgtt cggtggcttc
      181 accacaacga tgtacacctc gttgcatggc tacttcgtgt tcggacgcct cggctgcaac
      241 ctcgaaggct tcttcgcgac cctgggtggt gaaatggcac tctggtccat tgtcacgctg
      301 gccatcgaga ggtggctcgt cgtctgtaag cccatcagca acttccgctt cggggagaac
      361 cacgccatca tcggcgtcgt cttcacatgg atcatggcct gctcctgcgc cgtgcctccc
      421 ctactcggct ggtcccgtta catccccgag ggcatgcagt gctcatgcgg aatcgactat
      481 tacactcgtg ccgagggctt caacaacgag tcctttgtca tctacatgtt tcttgtccat
      541 gccctcattc ccttcgttgt gatcttcttc tgctatggtc gtctcgtctg cgccgtcaaa
      601 gatgccgctg cccagcagca ggagtccgag accacgcaga gggctgagcg cgaggtcacc
      661 cgcatggtca tcctcatggg cttcgcctac ttggtttgtt ggacccccta tgccagcacg
      721 gcctggtaca tcttcaccca caagggaagc agttttgggc ctatcttcat gacaatacca
      781 gctttctttg ccaagacctc tgctgtctac aacccggtc
//