LOCUS       EF458303                1497 bp    DNA     linear   VRT 25-JUL-2016
DEFINITION  Cobitis striata recombination activating protein 1 (RAG1) gene,
            partial cds.
ACCESSION   EF458303
VERSION     EF458303.2
KEYWORDS    .
SOURCE      Cobitis striata
  ORGANISM  Cobitis striata
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
            Cypriniformes; Cobitidae; Cobitinae; Cobitis.
REFERENCE   1  (bases 1 to 1497)
  AUTHORS   Mayden,R.L., Tang,K.L., Conway,K.W., Freyhof,J., Chamberlain,S.,
            Haskins,M., Schneider,L., Sudkamp,M., Wood,R.M., Agnew,M.,
            Bufalino,A., Sulaiman,Z., Miya,M., Saitoh,K. and He,S.
  TITLE     Phylogenetic relationships of Danio within the order Cypriniformes:
            a framework for comparative and evolutionary studies of a model
            species
  JOURNAL   J. Exp. Zool. B Mol. Dev. Evol. 308 (5), 642-654 (2007)
   PUBMED   17554749
REFERENCE   2  (bases 1 to 1497)
  AUTHORS   Mayden,R.L., Conway,K.W. and Tang,K.L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-FEB-2007) Biology, Saint Louis University, 3507
            Laclede Ave, Saint Louis, MO 63103, USA
REFERENCE   3  (bases 1 to 1497)
  AUTHORS   Chen,W.-J. and Agnew,M.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-MAY-2010) Department of Biology, Saint Louis
            University, 3507 Laclede Avenue, Saint Louis, MO 63103, USA
  REMARK    Sequence update by submitter
COMMENT     On May 19, 2010 this sequence version replaced EF458303.1.
FEATURES             Location/Qualifiers
     source          1..1497
                     /organism="Cobitis striata"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:149980"
     gene            <1..>1497
                     /gene="RAG1"
     mRNA            <1..>1497
                     /gene="RAG1"
                     /product="recombination activating protein 1"
     CDS             <1..>1497
                     /gene="RAG1"
                     /codon_start=1
                     /product="recombination activating protein 1"
                     /protein_id="ABR13920.2"
                     /translation="QIFQPLHTLRNAEKELLPGYHQFEWQPALKNVSSSWDVGIIDGL
                     SGWTSSVDDVPADTIARRFRYDVALVSALKDLEEDIMEGLRERGLDDSTCTSGFTVVV
                     KESCDGMGDVSEKHGSGPAVPEKAVRFSFTIMSISIRADGEEDAVTIFQEQKPNSELS
                     CRPLCLMFVDESXHETLTAILGPVVAERKAMLESRLILSVGGLLRSFRFFFRGTGYDE
                     KMVREMEXLEASGSTXVCTLCDSTRAEASHNMVLHSITRSHGENLERYEIWRTNPXSE
                     SADELRDRVKGVSAKPFMETQPTLDALHCDIGNATEFYKIFQDEIGEVFLQSNPSREE
                     RRRWRSALDKQLRXKLKLKPVMRMNGNFARRLMTREAAEAVCELIPSEERREALLKLM
                     DLYLQMKPVWRSTYPARDCPDQLCRYSYNSQQFADLLSTTFKYRYDGKITNYLHKTLA
                     HVPEIIERDGSIGAWASEGNESGNKLFRRFRKMNARQSKTFELEDVLKH"
BASE COUNT          371 a          370 c          399 g          339 t
ORIGIN      
        1 cagatattcc agcctctgca caccctccgc aatgctgaga aagagcttct ycccggctac
       61 catcagtttg aatggcagcc agctctgaaa aatgtttcca gctcctggga tgtgggaatc
      121 atygatggcc tctcaggttg gacttcctcc gtggatgatg tccctgcrga cacaatcgca
      181 agaagattcc gctatgatgt ggcactagtt tctgcattaa aagacttgga ggaggacatc
      241 atggaggggt tgagagagag aggcctggat gacagcacgt gcacytctgg ttttacygta
      301 gtggtaaagg aatcgtgcga cggtatggga gatgttagcg agaagcatgg atctggccca
      361 gcggtgcctg aaaaggcggt aaggttttcc ttcacaatca tgtccatttc mattcgagct
      421 gacggtgagg aggacgccgt cacgatcttt caagaacaga agccaaactc ngagctctcc
      481 tgcagacctc tgtgtctcat gtttgtggac gagtcasacc acgaaaccct cacggccatc
      541 ttgggacccg tggtggcaga gcgnaaagcc atgctggaaa gtcgtctaat cctctctgtt
      601 ggcggtttgc tacgttcctt caggttcttc ttccgaggca caggctatga cgagaagatg
      661 gtacgtgaaa tggaangtct agaagcttcn ggttccacgt angtgtgtac tctctgtgat
      721 tcgactcgag ccgaggcttc tcataacatg gtgctgcatt ccatcacacg cagccacggt
      781 gaaaaccttg agcgttacga aatctggagg acaaatcctt nctcggaatc ggccgatgaa
      841 ctccgtgacc gggtcaaggg tgtttctgcc aagcctttca tggagactca gcccaccttg
      901 gacgccctgc actgtgacat aggtaacgca accgaattct acaaaatctt tcaggatgag
      961 atcggtgagg ttttcttgca aagcaatccg agtcgagagg agcgccgacg ctggcgttca
     1021 gccctggaca agcagctgag gaakaaactg aagcttaagc ctgtgatgag aatgaacgga
     1081 aactttgccc gycgactgat gacgcgtgaa gccgcggagg cggtctgyga gctcattcct
     1141 tctgaggaac gtcgcgaggc tctgctgaag ctgatggatc tctacctaca gatgaagccc
     1201 gtgtggaggt ccacctatcc tgcgcgagac tgcccagacc aactgtgtcg atatagctac
     1261 aactcrcaac agtttgccga tctcctttca actacrttca agtaccgtta tgatggaaaa
     1321 atcaccaact accttcacaa gactctagcc catgtgcccg agatcattga gagagacggg
     1381 tctatcggag catgggccag cgaaggaaac gagtccggga acaagctgtt tcgtcgtttt
     1441 cgtaaaatga acgcgaggca gtcgaaaacc ttcgaacttg aagacgtact gaaacac
//