LOCUS       ONHMTBIWA1              2162 bp    DNA     linear   VRT 27-DEC-2006
DEFINITION  Oncorhynchus masou (biwa salmon) mitochondrial genes for ATPase 6,
            cytochrome oxidase subunit 3 and NADH dehydrogenase subunit 3 and
            4L, complete and partial cds.
ACCESSION   D63335
VERSION     D63335.1
KEYWORDS    .
SOURCE      mitochondrion Oncorhynchus masou (cherry salmon)
  ORGANISM  Oncorhynchus masou
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii;
            Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus.
REFERENCE   1  (bases 1 to 2162)
  AUTHORS   Oohara,I.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUL-1995) to the DDBJ/EMBL/GenBank databases.
            Contact:Ichiro Oohara
            National Research Institute of Aquaculture, Fish Nutrition
            Division; Nakatsu 422-1, Nansei, Watarai, Mie 516-01, Japan
REFERENCE   2  
  AUTHORS   Oohara,I. and Okazaki,T.
  TITLE     Genetic relationship among three subspecies of Oncorhynchus masou
            determined by mitochondrial DNA sequence analysis
  JOURNAL   Zool. Sci. 13, 189-198 (1996)
COMMENT     
FEATURES             Location/Qualifiers
     source          1..2162
                     /db_xref="taxon:8020"
                     /dev_stage="adult"
                     /mol_type="genomic DNA"
                     /note="Biwa salmon"
                     /note="Common name: Biwa salmon"
                     /organelle="mitochondrion"
                     /organism="Oncorhynchus masou"
                     /sub_species="rhodurus"
     CDS             <1..661
                     /codon_start=2
                     /product="ATPase 6"
                     /protein_id="BAA09648.1"
                     /transl_table=2
                     /translation="FMSPTYLGIPLIAVALALPWILFPTPSARWLNNRLITLQGWFIN
                     RFTQQLLLPLNLGGHKWAALLTSLMLFLITLNMLGLLPYTFTPTTQLSLNMGLAVPLW
                     LATVIIGMRNQPTAALGHLLPEGTPVPLIPVLIVIETISLFIRPLALGVRLTANLTAG
                     HLLIQLIATAAFVLLPLMPTVAILTSIVLFLLTLLEIAVAMIQAYVFVLLLSLYLQEN
                     V"
     CDS             661..1446
                     /codon_start=1
                     /product="cytochrome oxidase subunit 3"
                     /protein_id="BAA09649.1"
                     /transl_table=2
                     /translation="MAHQAHAYHMVDPSPWPLTGAIAALLLTSGTAVWFHFHSLTLLT
                     LGNVLLLLTMYQWWRDIIREGTFQGHHTPPVQKGLRYGMILFITSEVFFFLGFFWAFY
                     HASLAPTPELGGCWPPTGITTLDPFEVPLLNTAVLLASGVTVTWAHHSIMEGERKQTI
                     QALTLTILLGFYFTFLQGMEYYEAPFTIADGVYGSTFFVATGFHGLHVIIGSTFLAVC
                     LLRQVQYHFTSEHHFGFEAAAWYWHFVDVVWHFLYVSIYWWAS"
     tRNA            1446..1515
                     /note="Gly-tRNA"
     CDS             1516..1866
                     /codon_start=1
                     /product="NADH dehydrogenase subunit 3"
                     /protein_id="BAA09650.1"
                     /transl_table=2
                     /translation="MNLITTIITITITLSAVLATISFWLPQISPDAEKLSPYECGFDP
                     LGSARLPFSLRFFLIAILFLLFDLEIALLLPLPWGDQLNTPALTLIWSTAVLALLTLG
                     LIYEWTQGGLEWAE"
     tRNA            1865..1934
                     /note="Arg-tRNA"
     CDS             1935..>2162
                     /codon_start=1
                     /product="NADH dehydrogenase subunit 4L"
                     /protein_id="BAA09651.1"
                     /transl_table=2
                     /translation="MTPVHFSFTSAFILGLMGLAFHRTHLLSALLCLEGMMLSLFIAL
                     SLWALQMEATGYSVAPMLLLAFSACEASAGLA"
BASE COUNT          548 a          637 c          325 g          652 t
ORIGIN      
        1 atttatgagc cccacatacc tgggtattcc acttatcgct gtagcattag ccctcccatg
       61 aattcttttc cctacaccct ctgcccggtg attaaacaac cgcctaatta ccctgcaagg
      121 atgatttatc aaccgattta cccaacaact ccttttacca ctaaatttag ggggtcacaa
      181 atgagcggct ctactaacct ccctaatact gtttcttatt accctaaata tactaggtct
      241 actcccttat acatttaccc ccaccacgca actctcccta aatataggcc ttgcagtccc
      301 attatggctc gccacagtaa ttatcggcat acgaaatcaa cccactgccg ccctcggcca
      361 tcttttaccc gaagggaccc ccgtcccact aatccctgta ctgatcgtta tcgaaacaat
      421 tagccttttt attcgccccc tcgcccttgg cgtacgactt acagccaatc tcacagcagg
      481 ccaccttctc atccaactaa ttgctacagc agcctttgtt ctcttacctc taatacccac
      541 agtggcaatc ttaacttcta ttgttctatt tctacttacc cttcttgaaa ttgctgtagc
      601 cataattcaa gcatacgttt ttgttttact cctaagcctc tacctacaag aaaacgttta
      661 atggcacacc aagcacacgc ataccacatg gttgacccaa gcccctgacc tctaaccggc
      721 gcaatcgccg cccttttact tacatcaggc actgcagtct gattccattt ccactcactc
      781 acactactta ccctgggtaa tgttctatta cttctcacca tgtatcaatg atgacgagat
      841 attattcgag agggcacctt tcaaggacat cacacacccc cggtccaaaa aggattacga
      901 tatggtataa tcttatttat tacctccgaa gtattctttt tcctaggttt cttctgagcc
      961 ttctatcacg ctagccttgc ccccacacct gaattagggg gttgctgacc ccccacaggc
     1021 attacaactc tagacccctt tgaggtgccc cttcttaata ctgcagtcct tctagcatct
     1081 ggtgttaccg ttacatgagc ccatcatagc atcatagaag gtgaacgaaa acaaaccatt
     1141 caagctctta ctcttactat tttactagga ttttacttca ctttcctaca aggtatagaa
     1201 tactacgaag ccccatttac aatcgctgat ggcgtatacg gctctacttt ctttgtcgct
     1261 acaggattcc atggcctaca cgtaattatc ggctctacct ttttagccgt ttgccttcta
     1321 cgacaagttc aatatcactt tacatctgaa catcactttg gctttgaagc tgctgcttga
     1381 tattgacact ttgtagacgt tgtatggcac ttcctatacg tctctattta ctgatgagcc
     1441 tcataatctt tctagtatta ataagtataa gtgacttcca atcacccggt cttggttaaa
     1501 gtccaaggaa agataatgaa cttaattaca acaattatca ctattaccat cacactatct
     1561 gcagtactag ccactatttc tttctgatta ccacaaattt ctccagacgc agagaaattg
     1621 tccccctacg aatgtggatt tgacccttta ggatccgccc gcctaccctt ctccttacgc
     1681 ttcttcctaa tcgccatcct attccttcta tttgacttag aaatcgccct ccttctaccc
     1741 ctgccttgag gagatcaact caacaccccc gccctaacac tcatctgatc cactgctgta
     1801 cttgccctcc ttactctagg cttaatctat gaatgaaccc aaggaggctt agaatgagcc
     1861 gaataggcag ttagtccaaa acaagaccct tgatttcggc tcaaaagacc atggtttaag
     1921 tccatgaccg ccttatgaca ccagtacatt tcagctttac ttcagccttt attctagggc
     1981 ttataggact cgcgtttcac cgcacccacc ttctttcagc ccttctatgc ctagaaggaa
     2041 taatactctc tctatttatt gccctctccc tatgagccct tcaaatggaa gcaaccggct
     2101 attcagtagc tcctatactt ctcctggcat tttcagcctg tgaagcaagc gcaggtttag
     2161 cc
//